ZNF140 (Vicugna pacos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSVPAG00000011394 T113663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN

NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.799 0.926
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB

VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.799 0.926
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN

NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.799 0.926
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV

BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.799 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000010612 C2H2 ZF 159 181
ENSVPAP00000010612 C2H2 ZF 187 209
ENSVPAP00000010612 C2H2 ZF 215 237
ENSVPAP00000010612 C2H2 ZF 243 265
ENSVPAP00000010612 C2H2 ZF 271 293
ENSVPAP00000010612 C2H2 ZF 299 321
ENSVPAP00000010612 C2H2 ZF 327 349
ENSVPAP00000010612 C2H2 ZF 355 377
ENSVPAP00000010612 C2H2 ZF 383 405
ENSVPAP00000010612 C2H2 ZF 411 433

Links

Other C2H2 ZF family TFs
Other Vicugna pacos TFs

Invalid Input OrderBy

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action