ZNF345 (Vicugna pacos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSVPAG00000011869 T113674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF345
M04653_2.00
Homo sapiens
NGTMCRGTTGYNBRBGTTGCAA

TTGCAACVYVNRCAACYGKACN
SELEX
Yin et al.(2017)
ZNF345_eDBD_HT-SELEX
0.803 0.928
ZNF345
M04654_2.00
Homo sapiens
TYGCAACVYNNRCAACTGKACB

VGTMCAGTTGYNNRBGTTGCRA
SELEX
Yin et al.(2017)
ZNF345_eDBD_Methyl-HT-SELEX
0.803 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000011045 C2H2 ZF 62 84
ENSVPAP00000011045 C2H2 ZF 90 112
ENSVPAP00000011045 C2H2 ZF 118 140
ENSVPAP00000011045 C2H2 ZF 146 168
ENSVPAP00000011045 C2H2 ZF 174 196
ENSVPAP00000011045 C2H2 ZF 202 224
ENSVPAP00000011045 C2H2 ZF 230 252
ENSVPAP00000011045 C2H2 ZF 258 280
ENSVPAP00000011045 C2H2 ZF 286 308
ENSVPAP00000011045 C2H2 ZF 314 336
ENSVPAP00000011045 C2H2 ZF 342 364
ENSVPAP00000011045 C2H2 ZF 370 392
ENSVPAP00000011045 C2H2 ZF 398 420
ENSVPAP00000011045 C2H2 ZF 426 448
ENSVPAP00000011045 C2H2 ZF 454 476

Links

Other C2H2 ZF family TFs
Other Vicugna pacos TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G103783 Zea mays GRMZM2G103783 N 0.000
OS09G0491660 Oryza sativa OS09G0491660 N 0.000
PRUPE_ppa007888mg Prunus persica PRUPE_ppa007888mg N 0.000
Sb02g028460 Sorghum bicolor Sb02g028460 N 0.000
Si013408m.g Setaria italica Si013408m.g N 0.000
Si029222m.g Setaria italica Si029222m.g N 0.000
Pm028194 Prunus mume Pm028194 N 0.000
Pavir.Ba01707 Panicum virgatum Pavir.Ba01707 N 0.000
Pavir.Fb01943 Panicum virgatum Pavir.Fb01943 N 0.000
OS08G0510700 Oryza sativa OS08G0510700 N 0.000
ORUFI09G16000 Oryza rufipogon ORUFI09G16000 N 0.000
LPERR08G16990 Leersia perrieri LPERR08G16990 N 0.000
LPERR09G10970 Leersia perrieri LPERR09G10970 N 0.000
MLOC_75616 Hordeum vulgare MLOC_75616 N 0.000
OB09G21390 Oryza brachyantha OB09G21390 N 0.000
OGLUM09G15460 Oryza glumaepatula OGLUM09G15460 N 0.000
ONIVA09G15440 Oryza nivara ONIVA09G15440 N 0.000
OPUNC08G18190 Oryza punctata OPUNC08G18190 N 0.000
OPUNC09G13290 Oryza punctata OPUNC09G13290 N 0.000
Pavir.J33720 Panicum virgatum Pavir.J33720 N 0.000