CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000001419
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000001419
T113725_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC1
M04568_2.00
Homo sapiens
NRTGCCMMCN
NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_HT-SELEX
0.816
0.957
HIC1
M08924_2.00
Homo sapiens
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_HUMAN.H11MO.0.C
0.816
0.957
HIC1
M10265_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_02
0.816
0.957
HIC1
M10266_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_03
0.816
0.957
HIC1
M04569_2.00
Homo sapiens
NRTGCCMMCN
NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_Methyl-HT-SELEX
0.816
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000001403
C2H2 ZF
539
561
YRCSNCDKSYKDPATLRQHEKTH
ENSXMAP00000001403
C2H2 ZF
567
589
YPCSICGKKFTQRGTMTRHMRSH
ENSXMAP00000001403
C2H2 ZF
595
617
FACDSCGMRFTRQYRLTEHMRIH
ENSXMAP00000001403
C2H2 ZF
623
645
YECQVCGGKFAQQRNLISHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy