CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSXMAG00000009866
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000009866
T113857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL1
M04556_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX
0.803
0.884
OVOL1
M08919_2.00
Homo sapiens
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C
0.803
0.884
OVOL1
M04557_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX
0.803
0.884
Ovol1
M08974_2.00
Mus musculus
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C
0.799
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000009887
C2H2 ZF
119
141
FVCQVCQKTFQFQRMLNRHVKCH
ENSXMAP00000009887
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSXMAP00000009887
C2H2 ZF
176
199
YKCSLCDKAFTQRCSLESHMKKIH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy