CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_600019
(
Bigelowiella natans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_600019
T114156_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
JGI_V11_89999
C2H2 ZF
84
109
HACKRCSQRIYFKSRRELKQHMQDSH
JGI_V11_89999
C2H2 ZF
123
146
LKCNHQCGKSFNQRYNLKMHMRLH
JGI_V11_89999
C2H2 ZF
151
173
YRCPVCNATFNIKANFERHMGSH
JGI_V11_89999
C2H2 ZF
179
201
FVCTECGRPFLARHHLEAHMVTH
JGI_V11_89999
C2H2 ZF
208
231
YKCSFCPSKYHLKNNLARHVRIVH
JGI_V11_89999
C2H2 ZF
246
269
TKCTICNRTFSSNYTAQRHIARVH
JGI_V11_89999
C2H2 ZF
318
341
FKCALCETAFTTKTNLNRHVQSKH
JGI_V11_89999
C2H2 ZF
347
370
HVCPTCGNEYARKDTLELHIRAVH
JGI_V11_89999
C2H2 ZF
377
399
YKCSLCSRKVFTRLDLSNHMRLH
JGI_V11_89999
C2H2 ZF
405
427
YSCEICGAVFVQKGNLKRHMVLH
JGI_V11_89999
C2H2 ZF
434
457
HVCDICSRGFVLKSYLDAHKSKMH
JGI_V11_89999
C2H2 ZF
463
485
FKCTMCPQVFKRKNNLLIHMYSH
Links
Other
C2H2 ZF
family TFs
Other
Bigelowiella natans
TFs
0 Related TFs
">No related TF found