CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F503_00013
(
Ophiostoma piceae uamh
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
F503_00013
T114289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02666
M01875_2.00
Neurospora crassa
NNNMGCCACN
NGTGGCKNNN
PBM
Weirauch et al.(2014)
pTH8838
0.800
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPE04859
C2H2 ZF
14
36
HKCPYCDTEFTRHHNLKSHLLTH
EPE04859
C2H2 ZF
42
64
YICQGCDMRFRRLHDLKRHSKLH
EPE04859
C2H2 ZF
70
91
HICPHCDRKFARGDALARHSKG
Links
Other
C2H2 ZF
family TFs
Other
Ophiostoma piceae uamh
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy