ci (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004859 T114419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
(Direct) (Direct)
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
(Direct) (Direct)
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0088245 C2H2 ZF 451 476
FBpp0088245 C2H2 ZF 484 511
FBpp0088245 C2H2 ZF 517 541
FBpp0088245 C2H2 ZF 547 572
FBpp0088245 C2H2 ZF 578 603
FBpp0297298 C2H2 ZF 333 358
FBpp0297298 C2H2 ZF 366 393
FBpp0297298 C2H2 ZF 399 423
FBpp0297298 C2H2 ZF 429 454
FBpp0297298 C2H2 ZF 460 485
FBpp0300417 C2H2 ZF 451 476
FBpp0300417 C2H2 ZF 484 511

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ci Drosophila simulans FBgn0012866 I 0.827
ci Drosophila yakuba FBgn0022826 I 0.827
GG16466 Drosophila erecta FBgn0108697 I 0.827
GM23237 Drosophila sechellia FBgn0178104 I 0.827
GH23992 Drosophila grimshawi FBgn0131449 I 0.824
GK13666 Drosophila willistoni FBgn0215674 I 0.822
GJ14655 Drosophila virilis FBgn0201862 I 0.822
ACOM035918 Anopheles coluzzii ACOM035918 N 0.820
AQUA005019 Anopheles quadriannulatus AQUA005019 N 0.820
AARA011656 Anopheles arabiensis AARA011656 N 0.820
AMEM001579 Anopheles merus AMEM001579 N 0.820
AFUN004511 Anopheles funestus AFUN004511 I 0.815
AFAF006125 Anopheles farauti AFAF006125 I 0.815
LCUP015520 Lucilia cuprina LCUP015520 I 0.815
AALB008266 Anopheles albimanus AALB008266 I 0.815
ACHR002736 Anopheles christyi ACHR002736 I 0.815
AMAM007692 Anopheles maculatus AMAM007692 I 0.815
ACUA017715 Anopheles culicifacies ACUA017715 I 0.815
ADIR005874 Anopheles dirus ADIR005874 I 0.815
GA27838 Drosophila pseudoobscura FBgn0249202 I 0.815
ADAC002075 Anopheles darlingi ADAC002075 I 0.815
AGAP004637 Anopheles gambiae AGAP004637 I 0.815
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.815
AAEL012039 Aedes aegypti AAEL012039 I 0.815
GI14119 Drosophila mojavensis FBgn0136873 I 0.815
ASIS001386 Anopheles sinensis ASIS001386 I 0.815
AATE009625 Anopheles atroparvus AATE009625 I 0.815
GL18388 Drosophila persimilis FBgn0155989 I 0.815
AMIN000086 Anopheles minimus AMIN000086 I 0.815
TC003000 Tribolium castaneum TC003000 I 0.812
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.812
CpipJ_CPIJ000614 Culex pipiens CpipJ_CPIJ000614 I 0.812
LotgiG119241 Lottia gigantea LotgiG119241 I 0.786
GF19046 Drosophila ananassae FBgn0096058 I 0.785
EmuJ_000711000 Echinococcus multilocularis EmuJ_000711000 I 0.784
HmN_000840400 Hymenolepis microstoma HmN_000840400 I 0.784
TsM_000018800 Taenia solium TsM_000018800 I 0.782
B_00892 Schistosoma haematobium B_00892 I 0.778
Sjc_0091950 Schistosoma japonicum Sjc_0091950 I 0.769
DILT_0001859901 Diphyllobothrium latum DILT_0001859901 N 0.767
SPER_0002418901 Spirometra erinaceieuropaei SPER_0002418901 N 0.767
GB54885 Apis mellifera GB54885 I 0.766
LDEC013937 Leptinotarsa decemlineata LDEC013937 I 0.766
BGIBMGA004545 Bombyx mori BGIBMGA004545 I 0.764
KGM_04065 Danaus plexippus KGM_04065 I 0.764
L798_06214 Zootermopsis nevadensis L798_06214 I 0.761
PHUM413310 Pediculus humanus PHUM413310 I 0.759
ISCW005490 Ixodes scapularis ISCW005490 I 0.757