ci (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004859 T114419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
(Direct) (Direct)
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
(Direct) (Direct)
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0088245 C2H2 ZF 451 476
FBpp0088245 C2H2 ZF 484 511
FBpp0088245 C2H2 ZF 517 541
FBpp0088245 C2H2 ZF 547 572
FBpp0088245 C2H2 ZF 578 603
FBpp0297298 C2H2 ZF 333 358
FBpp0297298 C2H2 ZF 366 393
FBpp0297298 C2H2 ZF 399 423
FBpp0297298 C2H2 ZF 429 454
FBpp0297298 C2H2 ZF 460 485
FBpp0300417 C2H2 ZF 451 476
FBpp0300417 C2H2 ZF 484 511

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

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49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action