sob (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004892 T114421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00		 Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1		 (Direct) (Direct)
sob
M03675_2.00		 Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2		 (Direct) (Direct)
sob
M06088_2.00		 Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892		 (Direct) (Direct)
sob
M06089_2.00		 Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.814 0.957
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.814 0.957
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.814 0.957
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.896
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.896
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.896
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0077247 C2H2 ZF 395 417
FBpp0077247 C2H2 ZF 423 445
FBpp0077247 C2H2 ZF 451 473
FBpp0077247 C2H2 ZF 479 501
FBpp0077247 C2H2 ZF 507 529

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GJ17594 Drosophila virilis FBgn0204764 I 0.827
GK15478 Drosophila willistoni FBgn0217483 I 0.827
GM18136 Drosophila sechellia FBgn0173043 I 0.827
GL19470 Drosophila persimilis FBgn0157069 I 0.827
GG24427 Drosophila erecta FBgn0116559 I 0.827
GI17769 Drosophila mojavensis FBgn0140510 I 0.827
GE14841 Drosophila yakuba FBgn0232433 I 0.827
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.827
GH13192 Drosophila grimshawi FBgn0120669 I 0.825
GF14663 Drosophila ananassae FBgn0091690 I 0.825
GD22744 Drosophila simulans FBgn0194140 I 0.825
MCINX006060 Melitaea cinxia MCINX006060 I 0.823
KGM_20290 Danaus plexippus KGM_20290 I 0.823
LCUP002077 Lucilia cuprina LCUP002077 I 0.823
MDOA011451 Musca domestica MDOA011451 I 0.823
TC005788 Tribolium castaneum TC005788 I 0.821
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.821
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.819
GB49914 Apis mellifera GB49914 I 0.818
SINV17987 Solenopsis invicta SINV17987 I 0.818
NV12185 Nasonia vitripennis NV12185 I 0.818
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.814
GL18676 Drosophila persimilis FBgn0156277 I 0.814
GI23940 Drosophila mojavensis FBgn0146665 I 0.814
GF15254 Drosophila ananassae FBgn0092279 I 0.814
GH13710 Drosophila grimshawi FBgn0121186 I 0.814
MDOA005526 Musca domestica MDOA005526 I 0.814
GG24967 Drosophila erecta FBgn0117096 I 0.814
GK14650 Drosophila willistoni FBgn0216656 I 0.814
L798_02536 Zootermopsis nevadensis L798_02536 I 0.814
PHUM445550 Pediculus humanus PHUM445550 I 0.814
SINV18115 Solenopsis invicta SINV18115 I 0.814
TC005784 Tribolium castaneum TC005784 I 0.814
GB49901 Apis mellifera GB49901 I 0.814
bowl Drosophila melanogaster FBgn0004893 D 0.814
GD23254 Drosophila simulans FBgn0194642 I 0.814
GJ21213 Drosophila virilis FBgn0208346 I 0.814
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.814
GE18258 Drosophila yakuba FBgn0235686 I 0.814
LCUP002070 Lucilia cuprina LCUP002070 I 0.814
GM18435 Drosophila sechellia FBgn0173342 I 0.814
ACEP20581 Atta cephalotes ACEP20581 I 0.814
ODR2 Anopheles gambiae AGAP008222 I 0.814
AAEL008961 Aedes aegypti AAEL008961 I 0.814
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.813
ACOM030727 Anopheles coluzzii ACOM030727 I 0.811
L798_02529 Zootermopsis nevadensis L798_02529 I 0.811
ODR1 Anopheles gambiae AGAP007973 I 0.811
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.811
AEPI004813 Anopheles epiroticus AEPI004813 I 0.811
NV12189 Nasonia vitripennis NV12189 I 0.811
AATE001257 Anopheles atroparvus AATE001257 I 0.811
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.811
AMEM017192 Anopheles merus AMEM017192 I 0.811
AFAF004720 Anopheles farauti AFAF004720 I 0.811
AMIN006295 Anopheles minimus AMIN006295 I 0.811
AMEC005957 Anopheles melas AMEC005957 I 0.811
AAEL007453 Aedes aegypti AAEL007453 I 0.811
AFUN006320 Anopheles funestus AFUN006320 I 0.811
ACEP20577 Atta cephalotes ACEP20577 I 0.810
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.809
PHUM125080 Pediculus humanus PHUM125080 I 0.809
SMAR005255 Strigamia maritima SMAR005255 I 0.809
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.809
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.809
ADAC010373 Anopheles darlingi ADAC010373 I 0.806
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.806
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.805
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.805
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.805
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.805
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.805
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.805
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.805
ADAC005347 Anopheles darlingi ADAC005347 I 0.803
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.802
ISCW005884 Ixodes scapularis ISCW005884 I 0.799
ISCW017921 Ixodes scapularis ISCW017921 I 0.799
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.798
SMAR002904 Strigamia maritima SMAR002904 I 0.797
PHUM125070 Pediculus humanus PHUM125070 I 0.797
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.795
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.795
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.795
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.795
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.795
XP_002934454 Xenopus tropicalis XP_002934454 I 0.795
osr2 Oryzias latipes ENSORLG00000002797 I 0.795
OSR2 Procavia capensis ENSPCAG00000003419 I 0.795
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.795
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.795
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.795
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.795
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.795
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.795
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.795
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.795
OSR2 Microcebus murinus ENSMICG00000004390 I 0.795
OSR2 Canis familiaris ENSCAFG00000000493 I 0.795
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.795
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.795
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.795
OSR2 Equus caballus ENSECAG00000017784 I 0.795
OSR2 Homo sapiens ENSG00000164920 D 0.795
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.795
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.795
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.794
D917_07818 Trichinella nativa D917_07818 I 0.760
D917_03163 Trichinella nativa D917_03163 I 0.760
EFV49300 Trichinella spiralis EFV49300 I 0.760
ENSCING00000021903 Ciona intestinalis ENSCING00000021903 I 0.758