ci (Drosophila simulans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0012866 T114430_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.827 1.000
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.827 1.000
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0223230 C2H2 ZF 454 479
FBpp0223230 C2H2 ZF 487 514
FBpp0223230 C2H2 ZF 520 544
FBpp0223230 C2H2 ZF 550 575
FBpp0223230 C2H2 ZF 581 606

Links

Other C2H2 ZF family TFs
Other Drosophila simulans TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASIM_0001377801 Anisakis simplex ASIM_0001377801 N 0.000
ASU_09033 Ascaris suum ASU_09033 N 0.000
GPLIN_000941800 Globodera pallida GPLIN_000941800 I 0.000
L596_g22298 Steinernema carpocapsae L596_g22298 N 0.000
L889_g27966 Steinernema feltiae L889_g27966 N 0.000
L892_g13807 Steinernema scapterisci L892_g13807 N 0.000
L893_g29299 Steinernema glaseri L893_g29299 N 0.000
L898_g15267 Steinernema monticolum L898_g15267 N 0.000
TCNE_0001886101 Toxocara canis TCNE_0001886101 N 0.000
tetur30g00270 Tetranychus urticae tetur30g00270 I 0.000