jim (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0027339 T114456_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in dendrite morphogenesis. Is expressed in several structures, including embryonic brain; follicle cell; gut section; larval ventral nerve cord; and pharyngeal muscle cell. Orthologous to human ZNF708 (zinc finger protein 708). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
jim
M06123_2.00		 Drosophila melanogaster
BKKNNKTTTTKTTKB
VMAAMAAAAMNNMMV		 B1H
Zhu et al.(2011)
jim_F1-9_SOLEXA_2.5_FBgn0027339		 (Direct) (Direct)
jim
M06124_2.00		 Drosophila melanogaster
TSKTTTTTTTT
AAAAAAAAMSA		 B1H
Zhu et al.(2011)
jim_SANGER_2.5_FBgn0027339		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0078231 C2H2 ZF 329 351
FBpp0078231 C2H2 ZF 357 379
FBpp0078231 C2H2 ZF 385 407
FBpp0078231 C2H2 ZF 413 435
FBpp0078231 C2H2 ZF 525 547
FBpp0078231 C2H2 ZF 553 575
FBpp0078231 C2H2 ZF 581 603
FBpp0078231 C2H2 ZF 609 631
FBpp0078231 C2H2 ZF 637 661
FBpp0099541 C2H2 ZF 329 351
FBpp0099541 C2H2 ZF 357 379
FBpp0099541 C2H2 ZF 385 407
FBpp0099541 C2H2 ZF 413 435
FBpp0099541 C2H2 ZF 525 547
FBpp0099541 C2H2 ZF 553 575
FBpp0099541 C2H2 ZF 581 603
FBpp0099541 C2H2 ZF 609 631
FBpp0099541 C2H2 ZF 637 661
FBpp0293522 C2H2 ZF 329 351
FBpp0293522 C2H2 ZF 357 379
FBpp0293522 C2H2 ZF 385 407
FBpp0293522 C2H2 ZF 413 435
FBpp0293522 C2H2 ZF 529 551
FBpp0293522 C2H2 ZF 557 579
FBpp0293522 C2H2 ZF 585 607
FBpp0293522 C2H2 ZF 613 635
FBpp0293522 C2H2 ZF 642 666
FBpp0303109 C2H2 ZF 329 351
FBpp0303109 C2H2 ZF 357 379
FBpp0303109 C2H2 ZF 385 407
FBpp0303109 C2H2 ZF 413 435
FBpp0303109 C2H2 ZF 525 547
FBpp0303109 C2H2 ZF 553 575
FBpp0303109 C2H2 ZF 581 603
FBpp0303109 C2H2 ZF 609 631
FBpp0303109 C2H2 ZF 637 661
FBpp0305413 C2H2 ZF 329 351
FBpp0305413 C2H2 ZF 357 379
FBpp0305413 C2H2 ZF 385 407
FBpp0305413 C2H2 ZF 497 519
FBpp0305413 C2H2 ZF 525 547
FBpp0305413 C2H2 ZF 553 575
FBpp0305413 C2H2 ZF 581 603
FBpp0305413 C2H2 ZF 611 635
FBpp0305414 C2H2 ZF 329 351
FBpp0305414 C2H2 ZF 357 379
FBpp0305414 C2H2 ZF 385 407
FBpp0305414 C2H2 ZF 413 435
FBpp0305414 C2H2 ZF 525 547
FBpp0305414 C2H2 ZF 553 575
FBpp0305414 C2H2 ZF 581 603
FBpp0305414 C2H2 ZF 609 631
FBpp0305414 C2H2 ZF 637 661
FBpp0305415 C2H2 ZF 329 351
FBpp0305415 C2H2 ZF 357 379
FBpp0305415 C2H2 ZF 385 407
FBpp0305415 C2H2 ZF 497 519
FBpp0305415 C2H2 ZF 525 547
FBpp0305415 C2H2 ZF 553 575
FBpp0305415 C2H2 ZF 581 603
FBpp0305415 C2H2 ZF 609 633

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

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12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action