CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

CG3065 *(Drosophila melanogaster)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	FBgn0034946	T114515_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CG3065 M06134_2.00	Drosophila melanogaster	RCCACGCCCMY	RKGGGCGTGGY	B1H Zhu et al.(2011) CG3065_F1-3_SANGER_2.5_FBgn0034946	(Direct)	(Direct)
CG3065 M06135_2.00	Drosophila melanogaster	NNRCCACGCCCMCNN	NNGKGGGCGTGGYNN	B1H Zhu et al.(2011) CG3065_F1-3_SOLEXA_2.5_FBgn0034946	(Direct)	(Direct)
CG3065 M06136_2.00	Drosophila melanogaster	NNRCCACGCCCMYH	DRKGGGCGTGGYNN	B1H Zhu et al.(2011) CG3065_F1-5_SOLEXA_2.5_FBgn0034946	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0072062	C2H2 ZF	87	111	FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0072062	C2H2 ZF	117	141	FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0072062	C2H2 ZF	147	169	FECIQCTKKFSRSDHLTKHLATH
FBpp0072062	C2H2 ZF	324	346	FYCRQCEKRFKRQDDLNRHIRTH
FBpp0072062	C2H2 ZF	352	374	YACQQCCRRFVRSDHLKKHQQTH
FBpp0072063	C2H2 ZF	109	133	FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0072063	C2H2 ZF	139	163	FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0072063	C2H2 ZF	169	191	FECIQCTKKFSRSDHLTKHLATH
FBpp0072063	C2H2 ZF	346	368	FYCRQCEKRFKRQDDLNRHIRTH
FBpp0072063	C2H2 ZF	374	396	YACQQCCRRFVRSDHLKKHQQTH
FBpp0072064	C2H2 ZF	109	133	FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0072064	C2H2 ZF	139	163	FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0072064	C2H2 ZF	169	191	FECIQCTKKFSRSDHLTKHLATH
FBpp0072064	C2H2 ZF	346	368	FYCRQCEKRFKRQDDLNRHIRTH
FBpp0072064	C2H2 ZF	374	396	YACQQCCRRFVRSDHLKKHQQTH

Links
Other C2H2 ZF family TFs
Other *Drosophila melanogaster* TFs