CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA14887
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0074913
T114688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clamp
M01044_2.00
Drosophila melanogaster
YNTCYBKYTC
GARMVRGANR
PBM
Soruco et al.(2013)
CLAMP_Cterm6Zn
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0285736
C2H2 ZF
356
378
FSCNICGGLFSRYSSLWSHKKLH
FBpp0285736
C2H2 ZF
384
406
YKCSICGLAFAKAVYLKNHARIH
FBpp0285736
C2H2 ZF
412
434
YKCQTCGMQFSQSPHLKNHERTH
FBpp0285736
C2H2 ZF
440
462
YVCGVCDKGFARHATLWNHRRIH
FBpp0285736
C2H2 ZF
468
490
YKCEICGSAFSQAAHLKNHAKVH
FBpp0285736
C2H2 ZF
496
518
YKCEICSAAFADRFALKRHRGIH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy