CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA15529
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0075546
T114698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bteb2
M03683_2.00
Drosophila melanogaster
KAYACGCCCCYTN
NARGGGGCGTRTM
SELEX
Nitta et al.(2015)
Bteb2_1
0.807
0.913
Bteb2
M06121_2.00
Drosophila melanogaster
MCGCCCCC
GGGGGCGK
B1H
Zhu et al.(2011)
Bteb2_SANGER_2.5_FBgn0025679
0.807
0.913
Bteb2
M06122_2.00
Drosophila melanogaster
NNHMCGCCCCYYNN
NNRRGGGGCGKDNN
B1H
Zhu et al.(2011)
Bteb2_SOLEXA_2.5_FBgn0025679
0.807
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0273578
C2H2 ZF
200
224
YLCTFGNCEKLYAKPAHLKAHLRRH
FBpp0273578
C2H2 ZF
230
254
YACSWPECSWRFSRSDELARHRRSH
FBpp0273578
C2H2 ZF
260
282
YKCDYCAKCFARSDHLTKHRKVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy