CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA16696
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0076711
T114709_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sens
M03666_2.00
Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA
SELEX
Nitta et al.(2015)
sens_1
0.825
0.989
sens
M06056_2.00
Drosophila melanogaster
AAATCACDGC
GCHGTGATTT
B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573
0.825
0.989
sens
M06057_2.00
Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN
B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573
0.825
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0274414
C2H2 ZF
438
460
FQCKQCGKSFKRSSTLSTHLLIH
FBpp0274414
C2H2 ZF
466
488
YPCQYCGKRFHQKSDMKKHTYIH
FBpp0274414
C2H2 ZF
494
516
HKCTVCLKAFSQSSNLITHMRKH
FBpp0274414
C2H2 ZF
522
545
FGCGLCDQSFQRKVDLRRHRESRH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy