GA17730 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0077740 T114718_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sug
M03688_2.00
Drosophila melanogaster
BVCCCCCCRCVDN

NHBGYGGGGGGBV
SELEX
Nitta et al.(2015)
sug_1
0.759 0.948
sug
M06132_2.00
Drosophila melanogaster
MNKRCCCCCCRSSG

CSSYGGGGGGYMNK
B1H
Zhu et al.(2011)
sug_SANGER_5_FBgn0033782
0.759 0.948
sug
M06133_2.00
Drosophila melanogaster
VVSMCCCCCCRCRRN

NYYGYGGGGGGKSBB
B1H
Zhu et al.(2011)
sug_SOLEXA_5_FBgn0033782
0.759 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0278428 C2H2 ZF 124 149
FBpp0278428 C2H2 ZF 159 186
FBpp0278428 C2H2 ZF 192 214
FBpp0278428 C2H2 ZF 220 244
FBpp0278428 C2H2 ZF 250 276

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GL17162 Drosophila persimilis FBgn0154766 I 0.827
GK20769 Drosophila willistoni FBgn0222765 I 0.816
GH20305 Drosophila grimshawi FBgn0127769 I 0.809
GI19975 Drosophila mojavensis FBgn0142712 I 0.809
GF12930 Drosophila ananassae FBgn0089964 I 0.808
GM21434 Drosophila sechellia FBgn0176315 I 0.806
GJ21228 Drosophila virilis FBgn0208361 I 0.799
GE12506 Drosophila yakuba FBgn0230244 I 0.769
sug Drosophila melanogaster FBgn0033782 D 0.759
GG20347 Drosophila erecta FBgn0112538 I 0.759
GD10932 Drosophila simulans FBgn0182695 I 0.759