GA22020 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0082005 T114773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN

NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.823 0.986
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.823 0.986
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.823 0.986
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY

RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.823 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0284621 C2H2 ZF 190 212
FBpp0284621 C2H2 ZF 218 242
FBpp0284621 C2H2 ZF 248 270

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action