GH13192 (Drosophila grimshawi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0120669 T115295_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.825 0.991
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.825 0.991
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.825 0.991
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.825 0.991
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.816 0.965
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.816 0.965
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.816 0.965
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.795 0.896
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.795 0.896
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.795 0.896
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0147098 C2H2 ZF 466 488
FBpp0147098 C2H2 ZF 494 516
FBpp0147098 C2H2 ZF 522 544
FBpp0147098 C2H2 ZF 550 572
FBpp0147098 C2H2 ZF 578 600

Links

Other C2H2 ZF family TFs
Other Drosophila grimshawi TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL007453 Aedes aegypti AAEL007453 I 0.809
AAEL008961 Aedes aegypti AAEL008961 I 0.814
AATE001257 Anopheles atroparvus AATE001257 I 0.811
ACEP20577 Atta cephalotes ACEP20577 I 0.808
ACEP20581 Atta cephalotes ACEP20581 I 0.814
ACOM030727 Anopheles coluzzii ACOM030727 I 0.811
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.819
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.811
ADAC005347 Anopheles darlingi ADAC005347 I 0.803
ADAC010373 Anopheles darlingi ADAC010373 I 0.806
AEPI004813 Anopheles epiroticus AEPI004813 I 0.811
AFAF004720 Anopheles farauti AFAF004720 I 0.811
AFUN006320 Anopheles funestus AFUN006320 I 0.811
ODR1 Anopheles gambiae AGAP007973 I 0.811
ODR2 Anopheles gambiae AGAP008222 I 0.814
AMEC005957 Anopheles melas AMEC005957 I 0.811
AMEM017192 Anopheles merus AMEM017192 I 0.811
AMIN006295 Anopheles minimus AMIN006295 I 0.811
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.811
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.804
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.814
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.809
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.809
D917_03163 Trichinella nativa D917_03163 I 0.760
D917_07818 Trichinella nativa D917_07818 I 0.760
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.815
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.809
EFV49300 Trichinella spiralis EFV49300 I 0.760
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.795
OSR2 Canis familiaris ENSCAFG00000000493 I 0.795
ENSCING00000021903 Ciona intestinalis ENSCING00000021903 I 0.758
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.795
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.795
OSR2 Equus caballus ENSECAG00000017784 I 0.795
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.795
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.805
OSR2 Homo sapiens ENSG00000164920 D 0.795
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.805
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.795
OSR2 Microcebus murinus ENSMICG00000004390 I 0.795
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.795
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.795
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.795
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.795
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.795
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.795
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.795
osr2 Oryzias latipes ENSORLG00000002797 I 0.795
OSR2 Procavia capensis ENSPCAG00000003419 I 0.795
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.795
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.795
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.795
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.805
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.795
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.795
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.795
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.803
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.803
sob Drosophila melanogaster FBgn0004892 D 0.825
bowl Drosophila melanogaster FBgn0004893 D 0.816
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.816
GF14663 Drosophila ananassae FBgn0091690 I 0.827
GF15254 Drosophila ananassae FBgn0092279 I 0.816
GG24427 Drosophila erecta FBgn0116559 I 0.825
GG24967 Drosophila erecta FBgn0117096 I 0.816
GH13710 Drosophila grimshawi FBgn0121186 I 0.816
GI17769 Drosophila mojavensis FBgn0140510 I 0.825
GI23940 Drosophila mojavensis FBgn0146665 I 0.816
GL18676 Drosophila persimilis FBgn0156277 I 0.816
GL19470 Drosophila persimilis FBgn0157069 I 0.825
GM18136 Drosophila sechellia FBgn0173043 I 0.825
GM18435 Drosophila sechellia FBgn0173342 I 0.816
GD22744 Drosophila simulans FBgn0194140 I 0.823
GD23254 Drosophila simulans FBgn0194642 I 0.816
GJ17594 Drosophila virilis FBgn0204764 I 0.825
GJ21213 Drosophila virilis FBgn0208346 I 0.816
GK14650 Drosophila willistoni FBgn0216656 I 0.816
GK15478 Drosophila willistoni FBgn0217483 I 0.825
GE14841 Drosophila yakuba FBgn0232433 I 0.825
GE18258 Drosophila yakuba FBgn0235686 I 0.816
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.825
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.803
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.803
GB49901 Apis mellifera GB49901 I 0.814
GB49914 Apis mellifera GB49914 I 0.816
ISCW005884 Ixodes scapularis ISCW005884 I 0.799
ISCW017921 Ixodes scapularis ISCW017921 I 0.799
KGM_20290 Danaus plexippus KGM_20290 I 0.823
L798_02529 Zootermopsis nevadensis L798_02529 I 0.813
L798_02536 Zootermopsis nevadensis L798_02536 I 0.814
LCUP002070 Lucilia cuprina LCUP002070 I 0.814
LCUP002077 Lucilia cuprina LCUP002077 I 0.823
MCINX006060 Melitaea cinxia MCINX006060 I 0.823
MDOA005526 Musca domestica MDOA005526 I 0.814
MDOA011451 Musca domestica MDOA011451 I 0.823
NV12185 Nasonia vitripennis NV12185 I 0.816
NV12189 Nasonia vitripennis NV12189 I 0.811
PHUM125070 Pediculus humanus PHUM125070 I 0.797
PHUM125080 Pediculus humanus PHUM125080 I 0.809
PHUM445550 Pediculus humanus PHUM445550 I 0.814
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.802
SINV17987 Solenopsis invicta SINV17987 I 0.816
SINV18115 Solenopsis invicta SINV18115 I 0.814
SMAR002904 Strigamia maritima SMAR002904 I 0.797
SMAR005255 Strigamia maritima SMAR005255 I 0.809
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.794
TC005784 Tribolium castaneum TC005784 I 0.814
TC005788 Tribolium castaneum TC005788 I 0.823
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.796
XP_002934454 Xenopus tropicalis XP_002934454 I 0.795
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.823