GH13715 (Drosophila grimshawi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0121191 T115307_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sens-2
M06165_2.00
Drosophila melanogaster
RYAAATCWSDGCAYNC

GNRTGCHSWGATTTRY
B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632
0.825 0.986
GFI1B
M00240_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_REF
0.782 0.833
GFI1B
M04523_2.00
Homo sapiens
NMAATCASDGCNNBBCACTNN

NNAGTGVVNNGCHSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX
0.782 0.833
Gfi1b
M08098_2.00
Mus musculus
MAATCWCWGCH

DGCWGWGATTK
ChIP-seq
Mathelier et al.(2014)
MA0483.1
0.782 0.833
GFI1B
M08909_2.00
Homo sapiens
MAATCWSDGY

RCHSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A
0.782 0.833
Gfi1b
M08977_2.00
Mus musculus
MAAYCACWGH

DCWGWGRTTK
Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A
0.782 0.833
Gfi1b
M09514_2.00
Mus musculus
MAATCWSWGC

GCWSWGATTK
Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178
0.782 0.833
GFI1B
M10243_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_01
0.782 0.833
GFI1B
M10244_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_Q6
0.782 0.833
GFI1B
M00239_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_A204T
0.782 0.833
GFI1B
M04524_2.00
Homo sapiens
NMAATCASWGCDNNBCACTHN

NDAGTGVNNHGCWSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX
0.782 0.833
GFI1
M00238_2.00
Homo sapiens
NWAWMNNNN

NNNNKWTWN
PBM
Barrera et al.(2016)
GFI1_REF
0.774 0.848
GFI1
M04507_2.00
Homo sapiens
BMAATCACDGCNHBBCACTMN

NKAGTGVVDNGCHGTGATTKV
SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX
0.774 0.848
Gfi1
M02668_2.00
Rattus norvegicus
NMAATCWVHS

SDBWGATTKN
SELEX
Mathelier et al.(2014)
MA0038.1
0.774 0.848
GFI1
M08905_2.00
Homo sapiens
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C
0.774 0.848
Gfi1
M08984_2.00
Mus musculus
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C
0.774 0.848
GFI1
M10235_2.00
Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN

NNNVNNHAAATCWSDGYNNNNNNN
Transfac
Matys et al.(2006)
V$GFI1_01
0.774 0.848
GFI1
M10236_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1_Q6_01
0.774 0.848
GFI1
M04508_2.00
Homo sapiens
NNAGTGVVNHGCWSTGATTKV

BMAATCASWGCDNBBCACTNN
SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX
0.774 0.848
GFI1
M00236_2.00
Homo sapiens
NAATMNNNN

NNNNKATTN
PBM
Barrera et al.(2016)
GFI1_L400F
0.772 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0147621 C2H2 ZF 522 546
FBpp0147621 C2H2 ZF 551 573
FBpp0147621 C2H2 ZF 579 601
FBpp0147621 C2H2 ZF 607 629
FBpp0147621 C2H2 ZF 635 657
FBpp0147621 C2H2 ZF 663 686

Links

Other C2H2 ZF family TFs
Other Drosophila grimshawi TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GL26188 Drosophila persimilis FBgn0163770 I 0.827
GI23984 Drosophila mojavensis FBgn0146708 I 0.827
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.827
GK24242 Drosophila willistoni FBgn0226203 I 0.827
GJ21268 Drosophila virilis FBgn0208401 I 0.827
MDOA011065 Musca domestica MDOA011065 I 0.827
GG10437 Drosophila erecta FBgn0102746 I 0.825
GF15430 Drosophila ananassae FBgn0092455 I 0.825
sens-2 Drosophila melanogaster FBgn0051632 D 0.825
GE14143 Drosophila yakuba FBgn0231766 I 0.825
GM16223 Drosophila sechellia FBgn0171139 I 0.825
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.810
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I 0.798
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I 0.789
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I 0.788
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I 0.787
GFI1B Gallus gallus ENSGALG00000003478 I 0.787
GFI1B Meleagris gallopavo ENSMGAG00000006129 I 0.787
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I 0.787
Aan_R008865 Calypte anna Aan_R008865 I 0.787
LotgiG83709 Lottia gigantea LotgiG83709 I 0.787
Gfo_R007994 Geospiza fortis Gfo_R007994 I 0.787
Afo_R001655 Aptenodytes forsteri Afo_R001655 I 0.787
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I 0.785
Tal_R001363 Tyto alba Tal_R001363 I 0.785
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I 0.785
GFI1B Monodelphis domestica ENSMODG00000012600 I 0.784
GFI1B Bos taurus ENSBTAG00000012772 I 0.782
GFI1B Pan troglodytes ENSPTRG00000021505 I 0.782
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I 0.782
GFI1B Macaca mulatta ENSMMUG00000005948 I 0.782
Gfi1b Mus musculus ENSMUSG00000026815 D 0.782
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I 0.782
GFI1B Gorilla gorilla ENSGGOG00000015828 I 0.782
GFI1B Callithrix jacchus ENSCJAG00000018071 I 0.782
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I 0.782
Gfi1b Rattus norvegicus ENSRNOG00000011353 I 0.782
ENSP00000361195 Macaca fascicularis ENSP00000361195 I 0.782
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I 0.782
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I 0.782
GFI1B Equus caballus ENSECAG00000008127 I 0.782
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I 0.782
GFI1B Felis catus ENSFCAG00000027147 I 0.782
GFI1B Sus scrofa ENSSSCG00000005737 I 0.782
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I 0.782
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I 0.782
GFI1B Canis familiaris ENSCAFG00000019877 I 0.782
GFI1B Homo sapiens ENSG00000165702 D 0.782
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I 0.782
CGI_10017941 Crassostrea gigas CGI_10017941 I 0.778
CGI_10011355 Crassostrea gigas CGI_10011355 I 0.778
GFI1B Myotis lucifugus ENSMLUG00000006673 I 0.778
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I 0.777
PHUM248200 Pediculus humanus PHUM248200 I 0.775
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.775
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I 0.775
gfi1 Xenopus tropicalis XB-GENE-960553 I 0.774
TC012906 Tribolium castaneum TC012906 I 0.774
GFI1B Procavia capensis ENSPCAG00000012329 I 0.774
GFI1 Ochotona princeps ENSOPRG00000001473 I 0.774
GFI1 Pteropus vampyrus ENSPVAG00000006928 I 0.774
gfi1ab Takifugu rubripes ENSTRUG00000000415 I 0.774
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I 0.774
GFI1 Tursiops truncatus ENSTTRG00000000082 I 0.774
Gfi1 Rattus norvegicus ENSRNOG00000002042 D 0.774
GFI1 Sus scrofa ENSSSCG00000006902 I 0.774
Ogr09401 Ophisaurus gracilis Ogr09401 I 0.774
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I 0.774
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I 0.774
GFI1 Equus caballus ENSECAG00000006647 I 0.774
GFI1 Loxodonta africana ENSLAFG00000018346 I 0.774
GFI1 Callithrix jacchus ENSCJAG00000017609 I 0.774
Gfi1b Dipodomys ordii ENSDORG00000000342 I 0.774
GFI1 Canis familiaris ENSCAFG00000020155 I 0.774
GFI1 Gorilla gorilla ENSGGOG00000005320 I 0.774
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I 0.774
gfi1aa Danio rerio ENSDARG00000020746 I 0.774
GFI1 Felis catus ENSFCAG00000005914 I 0.774
GFI1 Homo sapiens ENSG00000162676 D 0.774
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I 0.774
GFI1B Cavia porcellus ENSCPOG00000026928 I 0.774
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I 0.774
GFI1 Erinaceus europaeus ENSEEUG00000000198 I 0.774
GFI1 Bos taurus ENSBTAG00000016723 I 0.774
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I 0.774
Gfi1 Mus musculus ENSMUSG00000029275 D 0.774
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I 0.774
GFI1B Otolemur garnettii ENSOGAG00000008879 I 0.774
GFI1 Otolemur garnettii ENSOGAG00000027913 I 0.774
GFI1 Monodelphis domestica ENSMODG00000011802 I 0.774
GFI1 Anolis carolinensis ENSACAG00000004498 I 0.774
GFI1 Myotis lucifugus ENSMLUG00000015191 I 0.774
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I 0.774
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I 0.774
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I 0.773
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I 0.773
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I 0.773
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I 0.773
gfi1ab Danio rerio ENSDARG00000044457 I 0.773
Aan_R000889 Calypte anna Aan_R000889 I 0.773
Gfo_R010648 Geospiza fortis Gfo_R010648 I 0.773
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I 0.773
GFI1 Taeniopygia guttata ENSTGUG00000006060 I 0.773
Tal_R006464 Tyto alba Tal_R006464 I 0.773
Pvit_00259 Pogona vitticeps Pvit_00259 I 0.773
Brh_R002465 Buceros rhinoceros Brh_R002465 I 0.773
Afo_R006147 Aptenodytes forsteri Afo_R006147 I 0.773
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I 0.773
GFI1 Meleagris gallopavo ENSMGAG00000008187 I 0.773
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I 0.773
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I 0.772
GFI1 Cavia porcellus ENSCPOG00000011727 I 0.771
GFI1B Loxodonta africana ENSLAFG00000022367 I 0.770
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I 0.770
ENSP00000399719 Macaca fascicularis ENSP00000399719 I 0.770
Sakowv30015302m.g Saccoglossus kowalevskii Sakowv30015302m.g I 0.770
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I 0.769
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I 0.769
GB40142 Apis mellifera GB40142 I 0.767
NV12917 Nasonia vitripennis NV12917 I 0.767
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I 0.766
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I 0.765
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I 0.765
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I 0.765
gfi1b Xenopus tropicalis XB-GENE-944426 I 0.765
gfi1aa Oryzias latipes ENSORLG00000005060 I 0.765
gfi1b.L Xenopus laevis XB-GENE-944429 I 0.765
gfi1b Danio rerio ENSDARG00000079947 I 0.765
TMUE_s0128002800 Trichuris muris TMUE_s0128002800 I 0.765
gfi1aa Takifugu rubripes ENSTRUG00000004744 I 0.765
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I 0.765
LotgiG129344 Lottia gigantea LotgiG129344 I 0.765
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I 0.765
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I 0.765
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I 0.765
NEMVEDRAFT_v1g182742 Nematostella vectensis NEMVEDRAFT_v1g182742 I 0.764
D918_06477 Trichuris suis D918_06477 I 0.762
TTRE_0000385401 Trichuris trichiura TTRE_0000385401 I 0.762
CapteG45287 Capitella teleta CapteG45287 I 0.760
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I 0.756
gfi1b Takifugu rubripes ENSTRUG00000004525 I 0.756
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I 0.756