CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH17362
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0124832
T115358_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sqz
M06109_2.00
Drosophila melanogaster
KTTTTTTTBDTDNDBB
VVHNHAHVAAAAAAAM
B1H
Zhu et al.(2011)
sqz_SANGER_5_FBgn0010768
0.779
0.974
sqz
M06110_2.00
Drosophila melanogaster
NNNKTTTTTTDBNBN
NVNVHAAAAAAMNNN
B1H
Zhu et al.(2011)
sqz_SOLEXA_5_FBgn0010768
0.779
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0151268
C2H2 ZF
174
196
YKCGSCSKSFANSSYLSQHTRIH
FBpp0151268
C2H2 ZF
202
224
YRCEICQRKFTQLSHLQQHIRTH
FBpp0151268
C2H2 ZF
230
254
YKCRHAGCPKAFSQLSNLQSHSRCH
FBpp0151268
C2H2 ZF
260
282
FKCNSCYKCFGDEVTLLEHIPKH
FBpp0151268
C2H2 ZF
291
313
HICQLCGKSYTQETYLQKHLQKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GI23901
Drosophila mojavensis
FBgn0146626
I
0.825
GJ23994
Drosophila virilis
FBgn0211081
I
0.825
GE25586
Drosophila yakuba
FBgn0242649
I
0.779
GD19275
Drosophila simulans
FBgn0190778
I
0.779
sqz
Drosophila melanogaster
FBgn0010768
D
0.779
GM26826
Drosophila sechellia
FBgn0181676
I
0.779
GG23160
Drosophila erecta
FBgn0115312
I
0.779
GL12634
Drosophila persimilis
FBgn0150240
I
0.777
GF16538
Drosophila ananassae
FBgn0093559
I
0.777
sqz
Drosophila pseudoobscura
FBgn0078967
I
0.777
GK13799
Drosophila willistoni
FBgn0215807
I
0.769
MDOA003639
Musca domestica
MDOA003639
I
0.767
LCUP016103
Lucilia cuprina
LCUP016103
I
0.767