GI22640 (Drosophila mojavensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0145368 T115687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB

VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.813 0.965
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN

NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.813 0.965
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN

NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.813 0.965
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV

BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.813 0.965
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN

NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.813 0.965
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB

VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.813 0.965
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB

VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.813 0.965
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK

MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.813 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0171857 C2H2 ZF 259 281
FBpp0171857 C2H2 ZF 294 316
FBpp0171857 C2H2 ZF 320 342
FBpp0171857 C2H2 ZF 348 370
FBpp0171857 C2H2 ZF 376 397

Links

Other C2H2 ZF family TFs
Other Drosophila mojavensis TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GJ23192 Drosophila virilis FBgn0210294 I 0.815
GH13116 Drosophila grimshawi FBgn0120593 I 0.815
GH22585 Drosophila grimshawi FBgn0130043 I 0.815
GD21953 Drosophila simulans FBgn0193368 I 0.813
GE19401 Drosophila yakuba FBgn0236744 I 0.813
GG24206 Drosophila erecta FBgn0116338 I 0.813
GM14336 Drosophila sechellia FBgn0169261 I 0.813
sna Drosophila melanogaster FBgn0003448 D 0.813
GK18251 Drosophila willistoni FBgn0220250 I 0.812
GF14523 Drosophila ananassae FBgn0091550 I 0.801
MDOA012986 Musca domestica MDOA012986 I 0.797
LCUP006861 Lucilia cuprina LCUP006861 I 0.797
GL26593 Drosophila persimilis FBgn0164175 I 0.763
GA17803 Drosophila pseudoobscura FBgn0077812 I 0.763