CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GI22640
(
Drosophila mojavensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0145368
T115687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB
VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.813
0.965
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN
NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.813
0.965
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN
NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.813
0.965
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV
BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.813
0.965
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN
NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.813
0.965
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB
VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.813
0.965
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB
VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.813
0.965
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK
MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.813
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0171857
C2H2 ZF
259
281
YKCDNCQKMYSTSMGLSKHRQFH
FBpp0171857
C2H2 ZF
294
316
HSCEECGKLYTTVGALKMHIRTH
FBpp0171857
C2H2 ZF
320
342
CKCPICGKAFSRPWLLQGHIRTH
FBpp0171857
C2H2 ZF
348
370
FQCPDCPRSFADRSNLRAHQQTH
FBpp0171857
C2H2 ZF
376
397
YACQVCHKSFSRMSLLNKHTSS
Links
Other
C2H2 ZF
family TFs
Other
Drosophila mojavensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy