CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM14357
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0169282
T116033_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.827
0.991
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.827
0.991
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.827
0.991
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.827
0.991
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.769
0.833
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0195834
C2H2 ZF
326
348
YHCQDCGKSYSTYSGLSKHQQFH
FBpp0195834
C2H2 ZF
361
383
FSCKNCDKTYVSLGALKMHIRTH
FBpp0195834
C2H2 ZF
387
409
CKCPICGKAFSRPWLLQGHIRTH
FBpp0195834
C2H2 ZF
415
437
FSCQHCNRAFADRSNLRAHMQTH
FBpp0195834
C2H2 ZF
443
464
YSCPTCTKSFSRMSLMAKHLQS
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy