CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GM15150
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0170070
T116043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pad
M06152_2.00
Drosophila melanogaster
TWCCCCTBY
RVAGGGGWA
B1H
Zhu et al.(2011)
pad_SANGER_5_FBgn0038418
0.827
1.000
pad
M06153_2.00
Drosophila melanogaster
NWWCCCCTNNNNNBNNNNNNNNNNN
NNNNNNNNNNNVNNNNNAGGGGWWN
B1H
Zhu et al.(2011)
pad_SOLEXA_5_FBgn0038418
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0196627
C2H2 ZF
713
735
LICPTCKREFKKKEHLTQHVKLH
FBpp0196627
C2H2 ZF
741
765
FKCSEEGCDKTFSRKEHLSRHLVSH
FBpp0196627
C2H2 ZF
771
793
YTCEVCKKPFSRKDNLNKHRRIH
FBpp0196627
C2H2 ZF
802
824
YCCDVCNKNFATKLHYEKHREMH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pad
Drosophila melanogaster
FBgn0038418
D
0.827
GE24391
Drosophila yakuba
FBgn0241511
I
0.822
GG16998
Drosophila erecta
FBgn0109226
I
0.822
GD19092
Drosophila simulans
FBgn0190599
I
0.815
GK13775
Drosophila willistoni
FBgn0215783
I
0.780
GA10237
Drosophila pseudoobscura
FBgn0070295
I
0.764