CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GM17699
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0172607
T116091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG4424
M03700_2.00
Drosophila melanogaster
NNCCCRCCC
GGGYGGGNN
SELEX
Nitta et al.(2015)
CG4424_1
0.825
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0199176
C2H2 ZF
184
206
HVCEICGNGYPRKSTLDTHMRRH
FBpp0199176
C2H2 ZF
212
234
YECEICHKSFHVNYQLKRHIRQH
FBpp0199176
C2H2 ZF
240
262
YTCQYCQRNFADRTSLVKHERTH
FBpp0199176
C2H2 ZF
268
290
YACKTCGKKFTYASVLKMHYKTH
FBpp0199176
C2H2 ZF
296
320
HICQLCNKSFARIHNLVAHLQTQQH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG4424
Drosophila melanogaster
FBgn0038765
D
0.825
GE25095
Drosophila yakuba
FBgn0242182
I
0.825
GG15664
Drosophila erecta
FBgn0107908
I
0.816