CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GM20729
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0175610
T116134_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG12769
M03687_2.00
Drosophila melanogaster
TCCCDCRGGA
TCCYGHGGGA
SELEX
Nitta et al.(2015)
CG12769_1
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0202206
C2H2 ZF
323
345
FECDVCNMKFSNGANMRRHKMRH
FBpp0202206
C2H2 ZF
351
373
YECRVCQKRFFRKDHLAEHFTTH
FBpp0202206
C2H2 ZF
379
402
YHCPICNRGFQRQIAMRAHFQNEH
FBpp0202206
C2H2 ZF
798
817
LTCHFCGIEFPDETLYFLHK
FBpp0202206
C2H2 ZF
826
850
WRCNICGEQLNNVYEFNSHLLSKSH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy