GJ23192 (Drosophila virilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0210294 T116648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB

VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.825 0.982
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN

NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.825 0.982
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN

NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.825 0.982
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV

BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.825 0.982
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN

NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.825 0.982
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB

VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.825 0.982
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB

VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.825 0.982
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK

MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.825 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0237609 C2H2 ZF 256 278
FBpp0237609 C2H2 ZF 291 313
FBpp0237609 C2H2 ZF 317 339
FBpp0237609 C2H2 ZF 345 367
FBpp0237609 C2H2 ZF 373 394

Links

Other C2H2 ZF family TFs
Other Drosophila virilis TFs

Invalid Input OrderBy

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action