CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GE24391
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0241511
T117080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pad
M06152_2.00
Drosophila melanogaster
TWCCCCTBY
RVAGGGGWA
B1H
Zhu et al.(2011)
pad_SANGER_5_FBgn0038418
0.822
0.978
pad
M06153_2.00
Drosophila melanogaster
NWWCCCCTNNNNNBNNNNNNNNNNN
NNNNNNNNNNNVNNNNNAGGGGWWN
B1H
Zhu et al.(2011)
pad_SOLEXA_5_FBgn0038418
0.822
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0269401
C2H2 ZF
718
740
LICPTCKREFKKKEHLTQHVKLH
FBpp0269401
C2H2 ZF
746
770
FKCSEEGCDKTFSRKEHLSRHLISH
FBpp0269401
C2H2 ZF
776
798
YTCEVCKKPFSRKDNLNKHKRIH
FBpp0269401
C2H2 ZF
807
829
YCCDVCNKNFATKLHYEKHREMH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG16998
Drosophila erecta
FBgn0109226
I
0.827
pad
Drosophila melanogaster
FBgn0038418
D
0.822
GM15150
Drosophila sechellia
FBgn0170070
I
0.822
GD19092
Drosophila simulans
FBgn0190599
I
0.810
GK13775
Drosophila willistoni
FBgn0215783
I
0.785
GA10237
Drosophila pseudoobscura
FBgn0070295
I
0.769