GA22634 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0244037 T117132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ovo
M03669_2.00
Drosophila melanogaster
DNMCCGTTA

TAACGGKNH
SELEX
Nitta et al.(2015)
ovo_1
0.827 1.000
ovo
M06064_2.00
Drosophila melanogaster
CHGTTAHW

WDTAACDG
B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028
0.827 1.000
ovo
M06065_2.00
Drosophila melanogaster
RGTHCCGTTAT

ATAACGGDACY
B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028
0.827 1.000
ovo
M06066_2.00
Drosophila melanogaster
DDTMCCGTTABNYN

NRNVTAACGGKAHH
B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028
0.827 1.000
ovo
M02671_2.00
Drosophila melanogaster
DCNGTTWSD

HSWAACNGH
SELEX
Mathelier et al.(2014)
MA0126.1
0.827 1.000
ovo
M09662_2.00
Drosophila melanogaster
DCNGTTAMWNNDV

BHNNWKTAACNGH
Misc
Kulakovskiy et al.(2009)
ovo
0.827 1.000
ovo
M10373_2.00
Drosophila melanogaster
NNNDCNGTTWSDDNN

NNHHSWAACNGHNNN
Transfac
Matys et al.(2006)
I$OVO_01
0.827 1.000
ovo
M10374_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$OVO_Q6
0.827 1.000
lin-48
M00614_2.00
Caenorhabditis elegans
HCCGTTAB

VTAACGGD
PBM
Narasimhan et al.(2015)
pTH9155
0.790 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0272717 C2H2 ZF 1397 1419
FBpp0272717 C2H2 ZF 1425 1447
FBpp0272717 C2H2 ZF 1453 1476

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

Invalid Input OrderBy

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action