GA23784 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0245183 T117145_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
klu
M03680_2.00
Drosophila melanogaster
HCCRCCCACGCAH

DTGCGTGGGYGGD
SELEX
Nitta et al.(2015)
klu_1
0.827 0.989
klu
M03681_2.00
Drosophila melanogaster
YMCGCCCMCGCAH

DTGCGKGGGCGKR
SELEX
Nitta et al.(2015)
klu_2
0.827 0.989
klu
M06114_2.00
Drosophila melanogaster
MCACCCMCRCA

TGYGKGGGTGK
B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469
0.827 0.989
klu
M06115_2.00
Drosophila melanogaster
NNNNMCACCCMCRCN

NGYGKGGGTGKNNNN
B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469
0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0275191 C2H2 ZF 661 684
FBpp0275191 C2H2 ZF 697 719
FBpp0275191 C2H2 ZF 725 747
FBpp0275191 C2H2 ZF 753 775

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GG13951 Drosophila erecta FBgn0106213 I 0.827
GF23812 Drosophila ananassae FBgn0100806 I 0.827
GH16578 Drosophila grimshawi FBgn0124049 I 0.827
GI13870 Drosophila mojavensis FBgn0136624 I 0.827
GL15747 Drosophila persimilis FBgn0153351 I 0.827
klu Drosophila melanogaster FBgn0013469 D 0.827
GD12837 Drosophila simulans FBgn0184562 I 0.827
GE20250 Drosophila yakuba FBgn0237569 I 0.827
GM24789 Drosophila sechellia FBgn0179651 I 0.827
GK18880 Drosophila willistoni FBgn0220878 I 0.827
GJ11729 Drosophila virilis FBgn0198983 I 0.827
MDOA010298 Musca domestica MDOA010298 I 0.822
LCUP004097 Lucilia cuprina LCUP004097 I 0.822
GB42180 Apis mellifera GB42180 I 0.812
PPAI001591 Phlebotomus papatasi PPAI001591 I 0.810
CLEC001135 Cimex lectularius CLEC001135 I 0.810
TC002783 Tribolium castaneum TC002783 I 0.810
ISCW010362 Ixodes scapularis ISCW010362 I 0.808
SMAR002322 Strigamia maritima SMAR002322 I 0.807
RPRC001140 Rhodnius prolixus RPRC001140 I 0.807
LDEC006538 Leptinotarsa decemlineata LDEC006538 I 0.807
HHAL008432-PA Halyomorpha halys HHAL008432-PA I 0.807
YQE_09824 Dendroctonus ponderosae YQE_09824 I 0.807
PHUM540640 Pediculus humanus PHUM540640 I 0.807
ACYPI004750 Acyrthosiphon pisum ACYPI004750 I 0.807
ACEP27848 Atta cephalotes ACEP27848 I 0.805
SINV25082 Solenopsis invicta SINV25082 I 0.805
L798_04121 Zootermopsis nevadensis L798_04121 I 0.804
NV17203 Nasonia vitripennis NV17203 I 0.802
L892_g30369 Steinernema scapterisci L892_g30369 I 0.777
Bm9026 Brugia malayi Bm9026 I 0.777
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.777
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.777
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.777
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.777
L898_g5287 Steinernema monticolum L898_g5287 I 0.777
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.777
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.777
LOAG_17546 Loa loa LOAG_17546 I 0.777
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.777
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.777
ASU_11043 Ascaris suum ASU_11043 I 0.774
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.774
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.773
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.773
scaffold108-EXSNAP2012.21 Pristionchus exspectatus scaffold108-EXSNAP2012.21 I 0.771
AMAM001551 Anopheles maculatus AMAM001551 I 0.771
AATE009348 Anopheles atroparvus AATE009348 I 0.771
ASIS008116 Anopheles sinensis ASIS008116 I 0.771
AAEL013544 Aedes aegypti AAEL013544 I 0.771
PPA26808 Pristionchus pacificus PPA26808 I 0.771
AGAP009899 Anopheles gambiae AGAP009899 I 0.771
ADAC007677 Anopheles darlingi ADAC007677 I 0.771
ACUA004708 Anopheles culicifacies ACUA004708 I 0.771
ACOM026725 Anopheles coluzzii ACOM026725 I 0.771
AFAF007233 Anopheles farauti AFAF007233 I 0.771
AMEM009101 Anopheles merus AMEM009101 I 0.771
AMIN006836 Anopheles minimus AMIN006836 I 0.771
AMEC014989 Anopheles melas AMEC014989 I 0.771
AFUN008770 Anopheles funestus AFUN008770 I 0.771
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.764
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.761
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.760
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.760
PTRK_0000952000 Parastrongyloides trichosuri PTRK_0000952000 I 0.760
PTRK_0001586500 Parastrongyloides trichosuri PTRK_0001586500 I 0.760