GA26220 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0247595 T117174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
rn
M03712_2.00 		Drosophila melanogaster
BTTTTTWHV
BDWAAAAAV		 SELEX
Nitta et al.(2015)
rn_1 		0.827 1.000
rn
M06180_2.00 		Drosophila melanogaster
GBNHTBDSNNBNTTTTTTTKSDHHB
VDDHSMAAAAAAANVNNSHVADNVC		 B1H
Zhu et al.(2011)
rn_SANGER_10_FBgn0259172 		0.827 1.000
rn
M06181_2.00 		Drosophila melanogaster
NNNNBNNNNNNNDTTTTTTVNNNNB
VNNNNBAAAAAAHNNNNNNNVNNNN		 B1H
Zhu et al.(2011)
rn_SOLEXA_5_FBgn0259172 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0281211 C2H2 ZF 495 517
FBpp0281211 C2H2 ZF 524 546
FBpp0281211 C2H2 ZF 552 574
FBpp0281211 C2H2 ZF 580 604
FBpp0281211 C2H2 ZF 610 632
FBpp0281211 C2H2 ZF 641 663
FBpp0301655 C2H2 ZF 287 309
FBpp0301655 C2H2 ZF 315 337
FBpp0301655 C2H2 ZF 343 367
FBpp0301655 C2H2 ZF 373 395
FBpp0301655 C2H2 ZF 404 426
FBpp0301656 C2H2 ZF 503 525
FBpp0301656 C2H2 ZF 532 554
FBpp0301656 C2H2 ZF 560 582
FBpp0301656 C2H2 ZF 588 612
FBpp0301656 C2H2 ZF 618 640
FBpp0301656 C2H2 ZF 649 671

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action