CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA26935
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0248306
T117182_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sry-beta
M10377_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$SRYBETA_Q6
0.773
0.929
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0283104
C2H2 ZF
185
205
PCHICGDLFSSQEILERHIKT
FBpp0283104
C2H2 ZF
242
264
LECRYCSKKFSHKRNVLRHMEVH
FBpp0283104
C2H2 ZF
270
292
YQCEKCGERFSLSWLMYNHLMRH
FBpp0283104
C2H2 ZF
299
321
LICDVCHQQFKTKRTYKHHLRTH
FBpp0283104
C2H2 ZF
328
350
YPCTDCEKSFVDKYTLKVHKRVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GE10851
Drosophila yakuba
FBgn0228688
I
0.773
GM12853
Drosophila sechellia
FBgn0167789
I
0.773
GG11722
Drosophila erecta
FBgn0104018
I
0.773
Sry-beta
Drosophila simulans
FBgn0062291
I
0.773
Sry-beta
Drosophila melanogaster
FBgn0003511
D
0.773