GA27838 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0249202 T117197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.815 0.948
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.815 0.948
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.815 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285383 C2H2 ZF 465 490
FBpp0285383 C2H2 ZF 498 525
FBpp0285383 C2H2 ZF 531 555
FBpp0285383 C2H2 ZF 561 586
FBpp0285383 C2H2 ZF 592 617

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

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45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action