GA27838 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0249202 T117197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.815 0.948
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.815 0.948
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.815 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285383 C2H2 ZF 465 490
FBpp0285383 C2H2 ZF 498 525
FBpp0285383 C2H2 ZF 531 555
FBpp0285383 C2H2 ZF 561 586
FBpp0285383 C2H2 ZF 592 617

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012039 Aedes aegypti AAEL012039 I 0.822
AALB008266 Anopheles albimanus AALB008266 I 0.822
AATE009625 Anopheles atroparvus AATE009625 I 0.822
ACHR002736 Anopheles christyi ACHR002736 I 0.822
ACUA017715 Anopheles culicifacies ACUA017715 I 0.822
ADAC002075 Anopheles darlingi ADAC002075 I 0.822
ADIR005874 Anopheles dirus ADIR005874 I 0.822
AFAF006125 Anopheles farauti AFAF006125 I 0.822
AFUN004511 Anopheles funestus AFUN004511 I 0.822
AGAP004637 Anopheles gambiae AGAP004637 I 0.822
AMAM007692 Anopheles maculatus AMAM007692 I 0.822
AMIN000086 Anopheles minimus AMIN000086 I 0.822
ASIS001386 Anopheles sinensis ASIS001386 I 0.822
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.822
GB54885 Apis mellifera GB54885 I 0.776
BGIBMGA004545 Bombyx mori BGIBMGA004545 I 0.774
CpipJ_CPIJ000614 Culex pipiens CpipJ_CPIJ000614 I 0.822
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.822
KGM_04065 Danaus plexippus KGM_04065 I 0.774
DAPPUDRAFT_346973 Daphnia pulex DAPPUDRAFT_346973 N 0.759
YQE_04546 Dendroctonus ponderosae YQE_04546 N 0.765
GF19046 Drosophila ananassae FBgn0096058 I 0.778
GG16466 Drosophila erecta FBgn0108697 I 0.815
GH23992 Drosophila grimshawi FBgn0131449 I 0.812
ci Drosophila melanogaster FBgn0004859 D 0.815
GI14119 Drosophila mojavensis FBgn0136873 I 0.803
GL18388 Drosophila persimilis FBgn0155989 I 0.827
GM23237 Drosophila sechellia FBgn0178104 I 0.815
ci Drosophila simulans FBgn0012866 I 0.815
GJ14655 Drosophila virilis FBgn0201862 I 0.812
GK13666 Drosophila willistoni FBgn0215674 I 0.813
ci Drosophila yakuba FBgn0022826 I 0.815
EmuJ_000711000 Echinococcus multilocularis EmuJ_000711000 I 0.794
HMEL016327 Heliconius melpomene HMEL016327 N 0.761
HmN_000840400 Hymenolepis microstoma HmN_000840400 I 0.792
ISCW005490 Ixodes scapularis ISCW005490 I 0.766
LDEC013937 Leptinotarsa decemlineata LDEC013937 I 0.776
LotgiG119241 Lottia gigantea LotgiG119241 I 0.794
LCUP015520 Lucilia cuprina LCUP015520 I 0.822
PHUM413310 Pediculus humanus PHUM413310 I 0.766
B_00892 Schistosoma haematobium B_00892 I 0.778
Sjc_0091950 Schistosoma japonicum Sjc_0091950 I 0.769
TsM_000018800 Taenia solium TsM_000018800 I 0.792
TC003000 Tribolium castaneum TC003000 I 0.822
L798_06214 Zootermopsis nevadensis L798_06214 I 0.768