rn (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0267337 T117235_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
rn
M03712_2.00		 Drosophila melanogaster
BTTTTTWHV
BDWAAAAAV		 SELEX
Nitta et al.(2015)
rn_1		 (Direct) (Direct)
rn
M06180_2.00		 Drosophila melanogaster
GBNHTBDSNNBNTTTTTTTKSDHHB
VDDHSMAAAAAAANVNNSHVADNVC		 B1H
Zhu et al.(2011)
rn_SANGER_10_FBgn0259172		 (Direct) (Direct)
rn
M06181_2.00		 Drosophila melanogaster
NNNNBNNNNNNNDTTTTTTVNNNNB
VNNNNBAAAAAAHNNNNNNNVNNNN		 B1H
Zhu et al.(2011)
rn_SOLEXA_5_FBgn0259172		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0288912 C2H2 ZF 263 285
FBpp0288912 C2H2 ZF 291 313
FBpp0288912 C2H2 ZF 319 343
FBpp0288912 C2H2 ZF 349 371
FBpp0288912 C2H2 ZF 380 402
FBpp0288914 C2H2 ZF 469 491
FBpp0288914 C2H2 ZF 498 520
FBpp0288914 C2H2 ZF 526 548
FBpp0288914 C2H2 ZF 554 578
FBpp0288914 C2H2 ZF 584 606
FBpp0288914 C2H2 ZF 615 637
FBpp0289745 C2H2 ZF 488 510
FBpp0289745 C2H2 ZF 517 539
FBpp0289745 C2H2 ZF 545 567
FBpp0289745 C2H2 ZF 573 597
FBpp0289745 C2H2 ZF 603 625
FBpp0289745 C2H2 ZF 634 656
FBpp0303173 C2H2 ZF 488 510
FBpp0303173 C2H2 ZF 517 539
FBpp0303173 C2H2 ZF 545 567
FBpp0303173 C2H2 ZF 573 597
FBpp0303173 C2H2 ZF 603 625
FBpp0303173 C2H2 ZF 634 656

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action