fgenesh2_kg.5__1344__AT3G49930.1 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.5__1344__AT3G49930.1 T117360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G49930
M06814_2.00 		Arabidopsis thaliana
DGATTTC
GAAATCH		 Dap-seq
OMalley et al.(2016)
AT3G49930_col_a 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1344__AT3G49930.1 C2H2 ZF 84 106

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

Invalid Input OrderBy

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action