CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.6793
(
Phytophthora lateralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.28083.6793
T117396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.6793
C2H2 ZF
71
95
FSCPVPNCGGRFHRKFTLHEHLKTH
fgenesh_scip_prom.28083.6793
C2H2 ZF
101
125
HQCPVAECGKRFSTSGNLARHRKLH
fgenesh_scip_prom.28083.6793
C2H2 ZF
130
154
ISCPAAHCTRVFTSREKLVPHLKVH
fgenesh_scip_prom.28083.6793
C2H2 ZF
160
185
HTCDFAGCGKTFSTAGNLTRHRRTQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora lateralis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra76299
Phytophthora ramorum
Phyra76299
N
0.827
Physo134728
Phytophthora sojae
Physo134728
N
0.815
PITG_10768
Phytophthora infestans
PITG_10768
N
0.812
F443_10780
Phytophthora parasitica
F443_10780
N
0.812
fgenesh_scip_prom.46568.7099
Phytophthora kernoviae
fgenesh_scip_prom.46568.7099
N
0.812
Phyra76300
Phytophthora ramorum
Phyra76300
N
0.762
fgenesh_scip_prom.28083.6792
Phytophthora lateralis
fgenesh_scip_prom.28083.6792
N
0.761