fgenesh_scip_prom.28083.7632 (Phytophthora lateralis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh_scip_prom.28083.7632 T117398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra76486
M01182_2.00 		Phytophthora ramorum
NRWKCHNN
NNDGMWYN		 PBM
Lambert et al.(2019)
pTH11170 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.28083.7632 C2H2 ZF 211 233
fgenesh_scip_prom.28083.7632 C2H2 ZF 239 263
fgenesh_scip_prom.28083.7632 C2H2 ZF 270 294
fgenesh_scip_prom.28083.7632 C2H2 ZF 301 325

Links

Other C2H2 ZF family TFs
Other Phytophthora lateralis TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra76486 Phytophthora ramorum Phyra76486 D 0.827
Physo137937 Phytophthora sojae Physo137937 I 0.812
HpaG801423 Hyaloperonospora arabidopsidis HpaG801423 I 0.801
F443_09524 Phytophthora parasitica F443_09524 I 0.797
estExt_fgenesh1_kg.C_70642 Phytophthora capsici estExt_fgenesh1_kg.C_70642 I 0.794
fgenesh_scip_prom.46568.9158 Phytophthora kernoviae fgenesh_scip_prom.46568.9158 I 0.790
PITG_01387 Phytophthora infestans PITG_01387 I 0.787