CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.1920
(
Phytophthora kernoviae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.46568.1920
T117408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.1920
C2H2 ZF
25
49
FECPIPLCGGRFHRKFTLHEHMKTH
fgenesh_scip_prom.46568.1920
C2H2 ZF
55
79
HQCPVKECGKRFSTSGNLARHKRLH
fgenesh_scip_prom.46568.1920
C2H2 ZF
84
108
MECPVTGCTRIFTSKDMLDKHQKVH
fgenesh_scip_prom.46568.1920
C2H2 ZF
114
139
HTCVVSGCGKTFSTAGNLTRHMKTQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora kernoviae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra73536
Phytophthora ramorum
Phyra73536
N
0.802
fgenesh_scip_prom.28083.10132
Phytophthora lateralis
fgenesh_scip_prom.28083.10132
N
0.802
Physo136109
Phytophthora sojae
Physo136109
N
0.802
F443_15487
Phytophthora parasitica
F443_15487
N
0.799
maker-pve_contig_328-snap-gene-0.22
Pythium vexans
maker-pve_contig_328-snap-gene-0.22
N
0.794