fgenesh_scip_prom.46568.5520 (Phytophthora kernoviae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh_scip_prom.46568.5520 T117414_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.5520 C2H2 ZF 368 390
fgenesh_scip_prom.46568.5520 C2H2 ZF 396 420
fgenesh_scip_prom.46568.5520 C2H2 ZF 426 450
fgenesh_scip_prom.46568.5520 C2H2 ZF 456 480

Links

Other C2H2 ZF family TFs
Other Phytophthora kernoviae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pve_contig_65-fgenesh-gene-0.18 Pythium vexans maker-pve_contig_65-fgenesh-gene-0.18 N 0.824
Phyra78502 Phytophthora ramorum Phyra78502 N 0.824
maker-par_contig_1574-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1574-fgenesh-gene-0.1 N 0.824
fgenesh_scip_prom.28083.3966 Phytophthora lateralis fgenesh_scip_prom.28083.3966 N 0.822
maker-pag1_scaffold_198-snap-gene-0.19 Pythium aphanidermatum maker-pag1_scaffold_198-snap-gene-0.19 N 0.819
F443_04902 Phytophthora parasitica F443_04902 N 0.812
Physo127993 Phytophthora sojae Physo127993 N 0.812
estExt_fgenesh1_kg.C_2620004 Phytophthora capsici estExt_fgenesh1_kg.C_2620004 N 0.812
HpaG806957 Hyaloperonospora arabidopsidis HpaG806957 N 0.812
PITG_19177 Phytophthora infestans PITG_19177 N 0.800
PYU1_G011596 Pythium ultimum PYU1_G011596 N 0.798
ALNC14_027820 Albugo laibachii ALNC14_027820 N 0.798
maker-pir_contig_91-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_91-fgenesh-gene-0.1 N 0.795
maker-piw_contig_312-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_312-fgenesh-gene-0.2 N 0.795
SPRG_08759 Saprolegnia parasitica SPRG_08759 N 0.764