CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.8334
(
Phytophthora kernoviae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.46568.8334
T117420_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.8334
C2H2 ZF
21
44
IFCYYCDRAFDDEKVLILHQKARH
fgenesh_scip_prom.46568.8334
C2H2 ZF
45
68
FKCPTCHKKLSTISGMLIHIQQVH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora kernoviae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra77632
Phytophthora ramorum
Phyra77632
N
0.807
F443_19065
Phytophthora parasitica
F443_19065
N
0.807
fgenesh_scip_prom.28083.239
Phytophthora lateralis
fgenesh_scip_prom.28083.239
N
0.807
PITG_02453
Phytophthora infestans
PITG_02453
N
0.801
Physo128311
Phytophthora sojae
Physo128311
N
0.797
HpaG807624
Hyaloperonospora arabidopsidis
HpaG807624
N
0.784