CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FGRRES_01877
(
Fusarium graminearum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FGRRES_01877
T117432_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN
NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN
NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.822
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01175_2.00
C2H2 ZF
50
71
QRCTWPDCGKTFKDLKAHMLTH
M01175_2.00
C2H2 ZF
78
104
KCPIQTCEYHTKGFARKYDKNRHTLTH
M01175_2.00
C2H2 ZF
109
139
MVCGFCPGSGSAAEKSFNRADVFKRHLTAVH
M01175_2.00
C2H2 ZF
172
191
KCSTCSQTFSNAQDFYEHLD
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEF74079
C2H2 ZF
278
299
QRCTWPDCGKTFKDLKAHMLTH
CEF74079
C2H2 ZF
306
332
KCPIQTCEYHTKGFARKYDKNRHTLTH
CEF74079
C2H2 ZF
337
367
MVCGFCPGSGSAAEKSFNRADVFKRHLTAVH
CEF74079
C2H2 ZF
400
419
KCSTCSQTFSNAQDFYEHLD
Links
Other
C2H2 ZF
family TFs
Other
Fusarium graminearum
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy