CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GALMADRAFT_294541
(
Galerina marginata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GALMADRAFT_294541
T117843_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_kg.C_10393_CONSTRUCT
M01189_2.00
PBM CONSTRUCTS
NRCTGCGSN
NSCGCAGYN
PBM
Lambert et al.(2019)
pTH11154
0.782
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDR84836
C2H2 ZF
282
304
YRCSACPRAFARAYNLKTHMATH
KDR84836
C2H2 ZF
312
337
HVCPQRSCGRSFSRKHDLGRHLISIH
Links
Other
C2H2 ZF
family TFs
Other
Galerina marginata
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy