CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GB54885
(
Apis mellifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GB54885
T118074_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.766
0.922
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.766
0.922
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.766
0.922
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB54885-PA
C2H2 ZF
464
489
TNCHWRDCGLEFPTQDDLVKHINNDH
GB54885-PA
C2H2 ZF
497
524
FVCGWEECSREEKPFKAQYMLVVHMRRH
GB54885-PA
C2H2 ZF
530
554
HKCTFEGCFKAYSRLENLKTHLRSH
GB54885-PA
C2H2 ZF
560
585
YTCEYPGCSKAFSNASDRAKHQNRTH
GB54885-PA
C2H2 ZF
591
616
YVCKAPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Apis mellifera
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIBMGA004545
Bombyx mori
BGIBMGA004545
I
0.819
KGM_04065
Danaus plexippus
KGM_04065
I
0.819
ISCW005490
Ixodes scapularis
ISCW005490
I
0.815
L798_06214
Zootermopsis nevadensis
L798_06214
I
0.811
PHUM413310
Pediculus humanus
PHUM413310
I
0.808
DAPPUDRAFT_346973
Daphnia pulex
DAPPUDRAFT_346973
N
0.806
HMEL016327
Heliconius melpomene
HMEL016327
N
0.803
CGI_10022956
Crassostrea gigas
CGI_10022956
N
0.800
BGLB001304
Biomphalaria glabrata
BGLB001304
N
0.795
CpipJ_CPIJ000614
Culex pipiens
CpipJ_CPIJ000614
I
0.781
CPIJ000614
Culex quinquefasciatus
CPIJ000614
I
0.781
AAEL012039
Aedes aegypti
AAEL012039
I
0.779
ASIS001386
Anopheles sinensis
ASIS001386
I
0.779
TC003000
Tribolium castaneum
TC003000
I
0.778
LCUP015520
Lucilia cuprina
LCUP015520
I
0.778
AALB008266
Anopheles albimanus
AALB008266
I
0.776
AFAF006125
Anopheles farauti
AFAF006125
I
0.776
AMAM007692
Anopheles maculatus
AMAM007692
I
0.776
AMIN000086
Anopheles minimus
AMIN000086
I
0.776
ASTEI06951
Anopheles stephensi
ASTEI06951
I
0.776
AFUN004511
Anopheles funestus
AFUN004511
I
0.776
ADIR005874
Anopheles dirus
ADIR005874
I
0.776
ACHR002736
Anopheles christyi
ACHR002736
I
0.776
ACUA017715
Anopheles culicifacies
ACUA017715
I
0.776
AATE009625
Anopheles atroparvus
AATE009625
I
0.776
GA27838
Drosophila pseudoobscura
FBgn0249202
I
0.776
AGAP004637
Anopheles gambiae
AGAP004637
I
0.776
GL18388
Drosophila persimilis
FBgn0155989
I
0.776
ADAC002075
Anopheles darlingi
ADAC002075
I
0.776
GK13666
Drosophila willistoni
FBgn0215674
I
0.769
ci
Drosophila simulans
FBgn0012866
I
0.766
ci
Drosophila melanogaster
FBgn0004859
D
0.766
ci
Drosophila yakuba
FBgn0022826
I
0.766
GH23992
Drosophila grimshawi
FBgn0131449
I
0.766
GM23237
Drosophila sechellia
FBgn0178104
I
0.766
GG16466
Drosophila erecta
FBgn0108697
I
0.766
GJ14655
Drosophila virilis
FBgn0201862
I
0.766
GI14119
Drosophila mojavensis
FBgn0136873
I
0.757