GB54885 (Apis mellifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GB54885 T118074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.766 0.922
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.766 0.922
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.766 0.922
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB54885-PA C2H2 ZF 464 489
GB54885-PA C2H2 ZF 497 524
GB54885-PA C2H2 ZF 530 554
GB54885-PA C2H2 ZF 560 585
GB54885-PA C2H2 ZF 591 616

Links

Other C2H2 ZF family TFs
Other Apis mellifera TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012039 Aedes aegypti AAEL012039 I 0.779
AALB008266 Anopheles albimanus AALB008266 I 0.776
AATE009625 Anopheles atroparvus AATE009625 I 0.776
ACHR002736 Anopheles christyi ACHR002736 I 0.776
ACUA017715 Anopheles culicifacies ACUA017715 I 0.776
ADAC002075 Anopheles darlingi ADAC002075 I 0.776
ADIR005874 Anopheles dirus ADIR005874 I 0.776
AFAF006125 Anopheles farauti AFAF006125 I 0.776
AFUN004511 Anopheles funestus AFUN004511 I 0.776
AGAP004637 Anopheles gambiae AGAP004637 I 0.776
AMAM007692 Anopheles maculatus AMAM007692 I 0.776
AMIN000086 Anopheles minimus AMIN000086 I 0.776
ASIS001386 Anopheles sinensis ASIS001386 I 0.779
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.776
BGLB001304 Biomphalaria glabrata BGLB001304 N 0.795
BGIBMGA004545 Bombyx mori BGIBMGA004545 I 0.819
CGI_10022956 Crassostrea gigas CGI_10022956 N 0.800
CpipJ_CPIJ000614 Culex pipiens CpipJ_CPIJ000614 I 0.781
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.781
KGM_04065 Danaus plexippus KGM_04065 I 0.819
DAPPUDRAFT_346973 Daphnia pulex DAPPUDRAFT_346973 N 0.806
GG16466 Drosophila erecta FBgn0108697 I 0.766
GH23992 Drosophila grimshawi FBgn0131449 I 0.766
ci Drosophila melanogaster FBgn0004859 D 0.766
GI14119 Drosophila mojavensis FBgn0136873 I 0.757
GL18388 Drosophila persimilis FBgn0155989 I 0.776
GA27838 Drosophila pseudoobscura FBgn0249202 I 0.776
GM23237 Drosophila sechellia FBgn0178104 I 0.766
ci Drosophila simulans FBgn0012866 I 0.766
GJ14655 Drosophila virilis FBgn0201862 I 0.766
GK13666 Drosophila willistoni FBgn0215674 I 0.769
ci Drosophila yakuba FBgn0022826 I 0.766
HMEL016327 Heliconius melpomene HMEL016327 N 0.803
ISCW005490 Ixodes scapularis ISCW005490 I 0.815
LCUP015520 Lucilia cuprina LCUP015520 I 0.778
PHUM413310 Pediculus humanus PHUM413310 I 0.808
TC003000 Tribolium castaneum TC003000 I 0.778
L798_06214 Zootermopsis nevadensis L798_06214 I 0.811