GLYMA05G33590 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA05G33590 T118346_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.818 1.000
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.818 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G33590.1 C2H2 ZF 129 150
GLYMA05G33590.1 C2H2 ZF 150 175

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_06925 Cicer arietinum Ca_06925 N 0.000
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N 0.000
evm.TU.supercontig_43.122 Carica papaya evm.TU.supercontig_43.122 N 0.000
e_gw1.1.456.1 Physcomitrella patens e_gw1.1.456.1 N 0.000
e_gw1.2.476.1 Physcomitrella patens e_gw1.2.476.1 N 0.000
GLYMA05G17994 Glycine max GLYMA05G17994 N 0.000
mgf004018m Mimulus guttatus mgf004018m N 0.000
MTR_5g007300 Medicago truncatula MTR_5g007300 N 0.000
OS08G0433400 Oryza sativa OS08G0433400 N 0.000
POPTR_0002s15900 Populus trichocarpa POPTR_0002s15900 N 0.000
SapurV1A.0697s0120 Salix purpurea SapurV1A.0697s0120 N 0.000
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N 0.000
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N 0.000
SELMODRAFT_78303 Selaginella moellendorffii SELMODRAFT_78303 N 0.000
SELMODRAFT_78848 Selaginella moellendorffii SELMODRAFT_78848 N 0.000
SELMODRAFT_90153 Selaginella moellendorffii SELMODRAFT_90153 N 0.000
Solyc01g009650.1 Solanum lycopersicum Solyc01g009650.1 N 0.000
Traes_2BL_216652F6B Triticum aestivum Traes_2BL_216652F6B N 0.000