CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA07G16290
(
Glycine max
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GLYMA07G16290
T118357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBE
M01858_2.00
Arabidopsis thaliana
NNNASWN
NWSTNNN
PBM
Weirauch et al.(2014)
pTH7538
0.805
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA07G16290.1
C2H2 ZF
28
50
YSCSFCQRGFSNAQALGGHMNIH
Links
Other
C2H2 ZF
family TFs
Other
Glycine max
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_7g063220
Medicago truncatula
MTR_7g063220
I
0.817
chr1.CM0147.870.nc
Lotus japonicus
chr1.CM0147.870.nc
I
0.817
ONIVA06G26970
Oryza nivara
ONIVA06G26970
I
0.805
OLONG_023754
Oryza longistaminata
OLONG_023754
I
0.805
OPUNC05G08760
Oryza punctata
OPUNC05G08760
I
0.805
ORGLA05G0088100
Oryza glaberrima
ORGLA05G0088100
I
0.805
OGLUM05G10360
Oryza glumaepatula
OGLUM05G10360
I
0.805
OB05G18710
Oryza brachyantha
OB05G18710
I
0.805
LPERR05G08090
Leersia perrieri
LPERR05G08090
I
0.805
MLOC_76482
Hordeum vulgare
MLOC_76482
I
0.805
MTR_1g070265
Medicago truncatula
MTR_1g070265
I
0.805
ORUFI05G10920
Oryza rufipogon
ORUFI05G10920
I
0.805
OBART05G10090
Oryza barthii
OBART05G10090
I
0.805
Traes_1AL_80D0BD0DC
Triticum aestivum
Traes_1AL_80D0BD0DC
I
0.805
Cagra.2117s0055
Capsella grandiflora
Cagra.2117s0055
I
0.805
Bostr.13129s0367
Boechera stricta
Bostr.13129s0367
I
0.805
Carubv10002935m.g
Capsella rubella
Carubv10002935m.g
I
0.805
Gorai.012G106300
Gossypium raimondii
Gorai.012G106300
I
0.805
Thhalv10015420m.g
Eutrema salsugineum
Thhalv10015420m.g
I
0.805
e_gw1.6.268.1
Physcomitrella patens
e_gw1.6.268.1
I
0.805
e_gw1.1.457.1
Physcomitrella patens
e_gw1.1.457.1
I
0.805
GSMUA_Achr7G26850_001
Musa acuminata
GSMUA_Achr7G26850_001
I
0.805
Traes_1BL_4026DC5011
Triticum aestivum
Traes_1BL_4026DC5011
I
0.805
TRIUR3_04794
Triticum urartu
TRIUR3_04794
I
0.805
cassava14614.m1
Manihot esculenta
cassava14614.m1
I
0.805
OS05G0286100
Oryza sativa
OS05G0286100
I
0.805
TCM_021875
Theobroma cacao
TCM_021875
I
0.805
Bo9g176590
Brassica oleracea
Bo9g176590
I
0.805
Bra009160
Brassica rapa
Bra009160
I
0.805
RBE
Arabidopsis lyrata
fgenesh2_kg.6__542__AT5G06070.1
I
0.805
RBE
Arabidopsis thaliana
AT5G06070
D
0.805
BGIOSGA018378
Oryza indica
BGIOSGA018378
I
0.805
GLYMA11G34285
Glycine max
GLYMA11G34285
I
0.794
LjSGA_038753.2
Lotus japonicus
LjSGA_038753.2
I
0.794
mgf024356m
Mimulus guttatus
mgf024356m
I
0.779
Lus10022204.g
Linum usitatissimum
Lus10022204.g
I
0.779
GRMZM2G409452
Zea mays
GRMZM2G409452
I
0.779
Pavir.Ba02387
Panicum virgatum
Pavir.Ba02387
I
0.779
Pavir.Bb00955
Panicum virgatum
Pavir.Bb00955
I
0.779
POPTR_0016s10480
Populus trichocarpa
POPTR_0016s10480
I
0.779
Sb02g009930
Sorghum bicolor
Sb02g009930
I
0.779
SapurV1A.0007s0800
Salix purpurea
SapurV1A.0007s0800
I
0.779
Traes_2AS_099955797
Triticum aestivum
Traes_2AS_099955797
I
0.779
Si032478m.g
Setaria italica
Si032478m.g
I
0.779
TRIUR3_25222
Triticum urartu
TRIUR3_25222
I
0.779
Traes_2DS_035AA95E3
Triticum aestivum
Traes_2DS_035AA95E3
I
0.779
Traes_2BS_0544D9D4B
Triticum aestivum
Traes_2BS_0544D9D4B
I
0.779
Lus10021213.g
Linum usitatissimum
Lus10021213.g
I
0.779
GRMZM2G443109
Zea mays
GRMZM2G443109
I
0.779
SapurV1A.0292s0190
Salix purpurea
SapurV1A.0292s0190
I
0.779
BRADI1G52490
Brachypodium distachyon
BRADI1G52490
I
0.779
TCM_021876
Theobroma cacao
TCM_021876
N
0.777
Aquca_003_00162
Aquilegia coerulea
Aquca_003_00162
N
0.777
28345.m000111
Ricinus communis
28345.m000111
N
0.777
Gorai.002G256500
Gossypium raimondii
Gorai.002G256500
N
0.777
cassava4410.m1
Manihot esculenta
cassava4410.m1
N
0.777
LPERR07G09750
Leersia perrieri
LPERR07G09750
N
0.769
GLYMA10G32810
Glycine max
GLYMA10G32810
N
0.769
Bo9g059250
Brassica oleracea
Bo9g059250
N
0.769
Carubv10028256m.g
Capsella rubella
Carubv10028256m.g
N
0.769
Ciclev10006751m.g
Citrus clementina
Ciclev10006751m.g
N
0.769
TCM_020819
Theobroma cacao
TCM_020819
N
0.769
MTR_1g075430
Medicago truncatula
MTR_1g075430
N
0.769
Cagra.19122s0001
Capsella grandiflora
Cagra.19122s0001
N
0.769
Bo7g065530
Brassica oleracea
Bo7g065530
N
0.769
GSMUA_Achr8G14360_001
Musa acuminata
GSMUA_Achr8G14360_001
N
0.769
Pm009419
Prunus mume
Pm009419
N
0.769
BGIOSGA025569
Oryza indica
BGIOSGA025569
N
0.769
Cucsa.117650
Cucumis sativus
Cucsa.117650
N
0.769
cassava32634.m1
Manihot esculenta
cassava32634.m1
N
0.769
Pm002649
Prunus mume
Pm002649
N
0.769
Cla021877
Citrullus lanatus
Cla021877
N
0.769
GLYMA12G06340
Glycine max
GLYMA12G06340
N
0.769
MTR_4g064873
Medicago truncatula
MTR_4g064873
N
0.769
GLYMA20G34840
Glycine max
GLYMA20G34840
N
0.769
Cla008348
Citrullus lanatus
Cla008348
N
0.769
Bostr.3148s0115
Boechera stricta
Bostr.3148s0115
N
0.769
scaffold_800693.1
Arabidopsis lyrata
scaffold_800693.1
N
0.769
ORGLA07G0099100
Oryza glaberrima
ORGLA07G0099100
N
0.769
ORUFI07G11810
Oryza rufipogon
ORUFI07G11810
N
0.769
orange1.1g037433m.g
Citrus sinensis
orange1.1g037433m.g
N
0.769
OS07G0417400
Oryza sativa
OS07G0417400
N
0.769
OPUNC07G10480
Oryza punctata
OPUNC07G10480
N
0.769
OGLUM07G11160
Oryza glumaepatula
OGLUM07G11160
N
0.769
Bra033683
Brassica rapa
Bra033683
N
0.769
Bra027500
Brassica rapa
Bra027500
N
0.769
ONIVA07G09630
Oryza nivara
ONIVA07G09630
N
0.769
ONIVA07G09640
Oryza nivara
ONIVA07G09640
N
0.769
OBART07G11660
Oryza barthii
OBART07G11660
N
0.769
MDP0000143134
Malus domestica
MDP0000143134
N
0.769
PRUPE_ppb012667mg
Prunus persica
PRUPE_ppb012667mg
N
0.769
PRUPE_ppa021945mg
Prunus persica
PRUPE_ppa021945mg
N
0.769
OB07G18110
Oryza brachyantha
OB07G18110
N
0.769
evm.TU.supercontig_44.98
Carica papaya
evm.TU.supercontig_44.98
N
0.769
Eucgr.H00184
Eucalyptus grandis
Eucgr.H00184
N
0.769
OLONG_012182
Oryza longistaminata
OLONG_012182
N
0.769
Gorai.011G172000
Gossypium raimondii
Gorai.011G172000
N
0.769
PRUPE_ppa016491mg
Prunus persica
PRUPE_ppa016491mg
N
0.769
gene30215-v1.0-hybrid
Fragaria vesca
gene30215-v1.0-hybrid
N
0.769
Cucsa.016990
Cucumis sativus
Cucsa.016990
N
0.766
Ciclev10022375m.g
Citrus clementina
Ciclev10022375m.g
N
0.766
PDK_20s1360411g002
Phoenix dactylifera
PDK_20s1360411g002
N
0.766
AMTR_s00009p00194700
Amborella trichopoda
AMTR_s00009p00194700
N
0.766
AMTR_s00012p00258620
Amborella trichopoda
AMTR_s00012p00258620
N
0.766
orange1.1g044013m.g
Citrus sinensis
orange1.1g044013m.g
N
0.766
PK22236.1
Cannabis sativa
PK22236.1
N
0.766
Cla006093
Citrullus lanatus
Cla006093
N
0.766
VIT_06s0004g05260
Vitis vinifera
VIT_06s0004g05260
N
0.766
MTR_1g070250
Medicago truncatula
MTR_1g070250
N
0.766
F775_00917
Aegilops tauschii
F775_00917
I
0.760
orange1.1g041626m.g
Citrus sinensis
orange1.1g041626m.g
I
0.757
Bra005874
Brassica rapa
Bra005874
I
0.757
Pavir.Aa03593
Panicum virgatum
Pavir.Aa03593
I
0.757
Bra023759
Brassica rapa
Bra023759
I
0.757
Pavir.Ab00024
Panicum virgatum
Pavir.Ab00024
I
0.757
ORUFI11G25670
Oryza rufipogon
ORUFI11G25670
I
0.757
PGSC0003DMG400017271
Solanum tuberosum
PGSC0003DMG400017271
I
0.757
ZFP11
Arabidopsis thaliana
AT2G42410
I
0.757
POPTR_0002s04260
Populus trichocarpa
POPTR_0002s04260
I
0.757
PGSC0003DMG400040225
Solanum tuberosum
PGSC0003DMG400040225
I
0.757
ONIVA11G23290
Oryza nivara
ONIVA11G23290
I
0.757
OS11G0707300
Oryza sativa
OS11G0707300
I
0.757
MDP0000225209
Malus domestica
MDP0000225209
I
0.757
OMERI07G13080
Oryza meridionalis
OMERI07G13080
I
0.757
OBART11G23770
Oryza barthii
OBART11G23770
I
0.757
Thhalv10021992m.g
Eutrema salsugineum
Thhalv10021992m.g
I
0.757
SUP
Arabidopsis lyrata
fgenesh2_kg.3__2524__AT3G23130.1
I
0.757
PDK_20s1313421g001
Phoenix dactylifera
PDK_20s1313421g001
I
0.757
PDK_20s1360411g001
Phoenix dactylifera
PDK_20s1360411g001
I
0.757
Thhalv10017870m.g
Eutrema salsugineum
Thhalv10017870m.g
I
0.757
OGLUM11G22950
Oryza glumaepatula
OGLUM11G22950
I
0.757
Gorai.008G226800
Gossypium raimondii
Gorai.008G226800
I
0.757
SapurV1A.0007s0790
Salix purpurea
SapurV1A.0007s0790
I
0.757
OLONG_005038
Oryza longistaminata
OLONG_005038
I
0.757
SapurV1A.0292s0200
Salix purpurea
SapurV1A.0292s0200
I
0.757
SapurV1A.0378s0150
Salix purpurea
SapurV1A.0378s0150
I
0.757
SapurV1A.0006s1030
Salix purpurea
SapurV1A.0006s1030
I
0.757
Gorai.005G047800
Gossypium raimondii
Gorai.005G047800
I
0.757
Bostr.25993s0539
Boechera stricta
Bostr.25993s0539
I
0.757
Bostr.19424s0332
Boechera stricta
Bostr.19424s0332
I
0.757
Bo3g003640
Brassica oleracea
Bo3g003640
I
0.757
TRIUR3_03721
Triticum urartu
TRIUR3_03721
I
0.757
Cagra.2636s0028
Capsella grandiflora
Cagra.2636s0028
I
0.757
Al_scaffold_0409_3
Arabidopsis lyrata
Al_scaffold_0409_3
I
0.757
VIT_05s0049g00070
Vitis vinifera
VIT_05s0049g00070
I
0.757
VIT_05s0049g00080
Vitis vinifera
VIT_05s0049g00080
I
0.757
Bo1g102390
Brassica oleracea
Bo1g102390
I
0.757
cassava3359.m1
Manihot esculenta
cassava3359.m1
I
0.757
29603.m000536
Ricinus communis
29603.m000536
I
0.757
BGIOSGA033510
Oryza indica
BGIOSGA033510
I
0.757
Pm009420
Prunus mume
Pm009420
I
0.757
Cagra.3462s0001
Capsella grandiflora
Cagra.3462s0001
I
0.757
SUP
Arabidopsis thaliana
AT3G23130
I
0.757
evm.TU.supercontig_44.99
Carica papaya
evm.TU.supercontig_44.99
I
0.757
scaffold_403098.1
Arabidopsis lyrata
scaffold_403098.1
I
0.757
gene08240-v1.0-hybrid
Fragaria vesca
gene08240-v1.0-hybrid
I
0.757
PRUPE_ppa015007mg
Prunus persica
PRUPE_ppa015007mg
I
0.757
cassava40050.m1
Manihot esculenta
cassava40050.m1
I
0.757
POPTR_0010s08530
Populus trichocarpa
POPTR_0010s08530
I
0.757
Si019050m.g
Setaria italica
Si019050m.g
I
0.757
Si024070m.g
Setaria italica
Si024070m.g
I
0.757
Carubv10024766m.g
Capsella rubella
Carubv10024766m.g
I
0.757
Carubv10016073m.g
Capsella rubella
Carubv10016073m.g
I
0.757
Solyc09g089590.1
Solanum lycopersicum
Solyc09g089590.1
I
0.757
Solyc06g053720.1
Solanum lycopersicum
Solyc06g053720.1
I
0.757
Ciclev10006961m.g
Citrus clementina
Ciclev10006961m.g
I
0.757
Gorai.006G247700
Gossypium raimondii
Gorai.006G247700
I
0.757