GLYMA13G34450 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA13G34450 T118413_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBE
M01858_2.00
Arabidopsis thaliana
NNNASWN

NWSTNNN
PBM
Weirauch et al.(2014)
pTH7538
0.777 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G34450.2 C2H2 ZF 58 80

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RBE Arabidopsis thaliana AT5G06070 D 0.777
Si019563m.g Setaria italica Si019563m.g I 0.764
cassava22028.m1 Manihot esculenta cassava22028.m1 I 0.767
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.825
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.825
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.815
Cucsa.313240 Cucumis sativus Cucsa.313240 I 0.803
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.767
e_gw1.14.264.1 Physcomitrella patens e_gw1.14.264.1 I 0.764
e_gw1.1.457.1 Physcomitrella patens e_gw1.1.457.1 I 0.774
e_gw1.186.49.1 Physcomitrella patens e_gw1.186.49.1 I 0.764
e_gw1.6.268.1 Physcomitrella patens e_gw1.6.268.1 I 0.774
mg013419m Mimulus guttatus mg013419m I 0.779
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I 0.777
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.825
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.825
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.815
cassava14614.m1 Manihot esculenta cassava14614.m1 I 0.777
29603.m000536 Ricinus communis 29603.m000536 I 0.825
Si024070m.g Setaria italica Si024070m.g I 0.825
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.825
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.825
TCM_021875 Theobroma cacao TCM_021875 I 0.777
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I 0.777
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I 0.777
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.825
TRIUR3_04794 Triticum urartu TRIUR3_04794 I 0.777
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.825
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.825
Ca_12901 Cicer arietinum Ca_12901 I 0.827
Cla008944 Citrullus lanatus Cla008944 I 0.767
Cla016442 Citrullus lanatus Cla016442 I 0.803
Cla021878 Citrullus lanatus Cla021878 I 0.815
Pm009420 Prunus mume Pm009420 I 0.825
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I 0.777
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.825
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.825
Pavir.Aa03593 Panicum virgatum Pavir.Aa03593 I 0.777
Pavir.Ab00024 Panicum virgatum Pavir.Ab00024 I 0.777
Pavir.Ab03315 Panicum virgatum Pavir.Ab03315 I 0.764
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.803
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.803
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.825
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.825
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.825
SapurV1A.0378s0150 Salix purpurea SapurV1A.0378s0150 I 0.777
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I 0.777
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.825
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.825
LjSGA_038753.2 Lotus japonicus LjSGA_038753.2 I 0.767
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.825
MDP0000225209 Malus domestica MDP0000225209 I 0.825
Lus10024875.g Linum usitatissimum Lus10024875.g I 0.769
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.815
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.825
Carubv10002935m.g Capsella rubella Carubv10002935m.g I 0.777
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.815
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.825
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.825
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.825
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.825
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.825
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.825
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.825
Gorai.008G226800 Gossypium raimondii Gorai.008G226800 I 0.777
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I 0.777
Lus10000705.g Linum usitatissimum Lus10000705.g I 0.769
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.815
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.825
Si019050m.g Setaria italica Si019050m.g I 0.777
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.825
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I 0.777
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.767
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.827
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.815
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.803
GRMZM2G344974 Zea mays GRMZM2G344974 I 0.764
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I 0.777
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.803
LPERR05G08090 Leersia perrieri LPERR05G08090 I 0.777
MLOC_76482 Hordeum vulgare MLOC_76482 I 0.777
MTR_1g070265 Medicago truncatula MTR_1g070265 I 0.777
OB02G10110 Oryza brachyantha OB02G10110 I 0.767
OB02G44430 Oryza brachyantha OB02G44430 I 0.764
OB04G12040 Oryza brachyantha OB04G12040 I 0.803
OB05G18710 Oryza brachyantha OB05G18710 I 0.777
OBART04G02370 Oryza barthii OBART04G02370 I 0.803
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.825
F775_21953 Aegilops tauschii F775_21953 I 0.803
ZFP11 Arabidopsis thaliana AT2G42410 I 0.825
SUP Arabidopsis thaliana AT3G23130 I 0.825
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.815
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.803
BGIOSGA018378 Oryza indica BGIOSGA018378 I 0.777
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.825
Bo1g017920 Brassica oleracea Bo1g017920 I 0.815
Bo1g102390 Brassica oleracea Bo1g102390 I 0.825
Bo3g003640 Brassica oleracea Bo3g003640 I 0.825
Bo9g176590 Brassica oleracea Bo9g176590 I 0.777
Bra005874 Brassica rapa Bra005874 I 0.825
Bra009160 Brassica rapa Bra009160 I 0.777
Bra013257 Brassica rapa Bra013257 I 0.815
Bra023759 Brassica rapa Bra023759 I 0.825
BRADI3G55760 Brachypodium distachyon BRADI3G55760 I 0.764
F775_00917 Aegilops tauschii F775_00917 I 0.774
OBART05G10090 Oryza barthii OBART05G10090 I 0.777
OBART11G23770 Oryza barthii OBART11G23770 I 0.825
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.803
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I 0.777
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.825
OS04G0168100 Oryza sativa OS04G0168100 I 0.803
OS05G0286100 Oryza sativa OS05G0286100 I 0.777
OS11G0707300 Oryza sativa OS11G0707300 I 0.825
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.825
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.825
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.825
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.815
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.825
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.803
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.825
Sb04g037590 Sorghum bicolor Sb04g037590 I 0.764
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.803
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.825
Si011797m.g Setaria italica Si011797m.g I 0.813
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.803
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I 0.777
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I 0.777
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.825
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.825
OLONG_022667 Oryza longistaminata OLONG_022667 I 0.803
OLONG_023754 Oryza longistaminata OLONG_023754 I 0.777
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.803
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.825
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.803
ONIVA06G26970 Oryza nivara ONIVA06G26970 I 0.777
OPUNC11G05640 Oryza punctata OPUNC11G05640 I 0.767
OPUNC05G08760 Oryza punctata OPUNC05G08760 I 0.777
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.825
TCM_021876 Theobroma cacao TCM_021876 N 0.805
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.805
Pm002649 Prunus mume Pm002649 N 0.792
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.757
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.805
28345.m000111 Ricinus communis 28345.m000111 N 0.805