GLYMA19G36430 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA19G36430 T118441_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.827 0.977
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.797 0.953
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.797 0.884
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.797 0.884
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.797 0.884
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.792 0.907
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.792 0.907
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.792 0.860
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.792 0.860
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.774 0.860
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.774 0.860
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.764 0.907
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.764 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G36430.2 C2H2 ZF 143 164
GLYMA19G36430.2 C2H2 ZF 163 189
GLYMA19G36430.3 C2H2 ZF 143 164
GLYMA19G36430.3 C2H2 ZF 163 189

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

642 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_03662 Capronia coronata A1O1_03662 I 0.000
A1O3_07301 Capronia epimyces A1O3_07301 I 0.000
A1O5_07986 Cladophialophora psammophila A1O5_07986 I 0.000
A1O9_04665 Exophiala aquamarina A1O9_04665 I 0.000
HMPREF1120_01206 Exophiala dermatitidis HMPREF1120_01206 I 0.000
HMPREF1541_01683 Cyphellophora europaea HMPREF1541_01683 I 0.000
MAJ_07934 Metarhizium majus MAJ_07934 I 0.000
MGU_10998 Metarhizium guizhouense MGU_10998 I 0.000
MGU_11750 Metarhizium guizhouense MGU_11750 I 0.000
PV05_04442 Exophiala xenobiotica PV05_04442 I 0.000
PV06_01114 Exophiala oligosperma PV06_01114 I 0.000
PV07_04386 Cladophialophora immunda PV07_04386 I 0.000
PV08_00413 Exophiala spinifera PV08_00413 I 0.000
PV09_03275 Verruconis gallopava PV09_03275 I 0.000
PV10_07034 Exophiala mesophila PV10_07034 I 0.000
PV11_00550 Exophiala sideris PV11_00550 I 0.000
TESG_05885 Trichophyton tonsurans TESG_05885 I 0.000
TESG_08227 Trichophyton tonsurans TESG_08227 I 0.000
X797_012191 Metarhizium robertsii X797_012191 I 0.000
Z517_04076 Fonsecaea pedrosoi Z517_04076 I 0.000
Z518_08321 Rhinocladiella mackenziei Z518_08321 I 0.000
Z519_07822 Cladophialophora bantiana Z519_07822 I 0.000