GLYMA20G31650 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA20G31650 T118451_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.797 0.933
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.797 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G31650.1 C2H2 ZF 344 366
GLYMA20G31650.1 C2H2 ZF 365 396

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0287s0150 Salix purpurea SapurV1A.0287s0150 I 0.827
GLYMA16G27280 Glycine max GLYMA16G27280 I 0.827
SapurV1A.2334s0030 Salix purpurea SapurV1A.2334s0030 I 0.827
GLYMA10G35940 Glycine max GLYMA10G35940 I 0.827
GSMUA_Achr10G15970_001 Musa acuminata GSMUA_Achr10G15970_001 I 0.798
Bostr.1040s0032 Boechera stricta Bostr.1040s0032 I 0.797
Cagra.12398s0002 Capsella grandiflora Cagra.12398s0002 I 0.797
Carubv10008876m.g Capsella rubella Carubv10008876m.g I 0.797
gene27486-v1.0-hybrid Fragaria vesca gene27486-v1.0-hybrid I 0.797
mgf000060m Mimulus guttatus mgf000060m I 0.797
cassava24483.valid.m1 Manihot esculenta cassava24483.valid.m1 I 0.797
Ca_04300 Cicer arietinum Ca_04300 I 0.797
PRUPE_ppa004510mg Prunus persica PRUPE_ppa004510mg I 0.797
Pm022201 Prunus mume Pm022201 I 0.797
MDP0000141403 Malus domestica MDP0000141403 I 0.797
STOP1 Vitis vinifera VIT_18s0072g00840 I 0.797
POPTR_0019s11520 Populus trichocarpa POPTR_0019s11520 I 0.797
MDP0000551046 Malus domestica MDP0000551046 I 0.797
Pavir.J12018 Panicum virgatum Pavir.J12018 I 0.797
STOP1 Arabidopsis lyrata fgenesh2_kg.1__3547__AT1G34370.2 I 0.797
Thhalv10007411m.g Eutrema salsugineum Thhalv10007411m.g I 0.797
Bo8g027000 Brassica oleracea Bo8g027000 I 0.797
MDP0000199559 Malus domestica MDP0000199559 I 0.797
Pavir.J06328 Panicum virgatum Pavir.J06328 I 0.797
STOP1 Arabidopsis thaliana AT1G34370 D 0.797
PK23301.1 Cannabis sativa PK23301.1 I 0.797
MDP0000807856 Malus domestica MDP0000807856 I 0.797
GSMUA_Achr5G01170_001 Musa acuminata GSMUA_Achr5G01170_001 I 0.797
Cla016623 Citrullus lanatus Cla016623 I 0.791
Cucsa.079940 Cucumis sativus Cucsa.079940 I 0.791
Eucgr.F02627 Eucalyptus grandis Eucgr.F02627 I 0.788
TCM_036719 Theobroma cacao TCM_036719 I 0.788
Solyc11g017140.1 Solanum lycopersicum Solyc11g017140.1 I 0.788
PGSC0003DMG400009234 Solanum tuberosum PGSC0003DMG400009234 I 0.788
cassava22193.valid.m1 Manihot esculenta cassava22193.valid.m1 I 0.778
OB01G47470 Oryza brachyantha OB01G47470 I 0.774
MLOC_10987 Hordeum vulgare MLOC_10987 I 0.774
OBART01G38810 Oryza barthii OBART01G38810 I 0.774
OPUNC01G37530 Oryza punctata OPUNC01G37530 I 0.774
Ciclev10000850m.g Citrus clementina Ciclev10000850m.g I 0.774
LPERR01G33350 Leersia perrieri LPERR01G33350 I 0.774
OLONG_020555 Oryza longistaminata OLONG_020555 I 0.774
orange1.1g009831m.g Citrus sinensis orange1.1g009831m.g I 0.774
BRADI2G56320 Brachypodium distachyon BRADI2G56320 I 0.774
Bra040971 Brassica rapa Bra040971 I 0.774
BGIOSGA004888 Oryza indica BGIOSGA004888 I 0.774
F775_04088 Aegilops tauschii F775_04088 I 0.774
Pavir.J14096 Panicum virgatum Pavir.J14096 I 0.774
GRMZM2G129428 Zea mays GRMZM2G129428 I 0.774
GRMZM2G075956 Zea mays GRMZM2G075956 I 0.774
Aquca_017_00778 Aquilegia coerulea Aquca_017_00778 I 0.774
ONIVA01G43630 Oryza nivara ONIVA01G43630 I 0.774
Traes_3DL_0284E68CC1 Triticum aestivum Traes_3DL_0284E68CC1 I 0.774
ORGLA01G0326400 Oryza glaberrima ORGLA01G0326400 I 0.774
TRAES3BF044200110CFD_g Triticum aestivum TRAES3BF044200110CFD_g I 0.774
Traes_3AL_00FAACD5D Triticum aestivum Traes_3AL_00FAACD5D I 0.774
Si001053m.g Setaria italica Si001053m.g I 0.774
AMTR_s00017p00086440 Amborella trichopoda AMTR_s00017p00086440 I 0.774
Sb03g041170 Sorghum bicolor Sb03g041170 I 0.774
TRIUR3_13796 Triticum urartu TRIUR3_13796 I 0.774
OS01G0871200 Oryza sativa OS01G0871200 I 0.774
ORUFI01G42150 Oryza rufipogon ORUFI01G42150 I 0.774
PDK_20s1338731g001 Phoenix dactylifera PDK_20s1338731g001 I 0.768
Gorai.006G131700 Gossypium raimondii Gorai.006G131700 I 0.764
MDP0000453148 Malus domestica MDP0000453148 I 0.764
SELMODRAFT_58350 Selaginella moellendorffii SELMODRAFT_58350 I 0.763
Si036555m.g Setaria italica Si036555m.g I 0.763
Sb01g001950 Sorghum bicolor Sb01g001950 I 0.763
LPERR03G34390 Leersia perrieri LPERR03G34390 I 0.763
SELMODRAFT_48272 Selaginella moellendorffii SELMODRAFT_48272 I 0.763
OB03G47410 Oryza brachyantha OB03G47410 I 0.763
Pavir.Ia00191 Panicum virgatum Pavir.Ia00191 I 0.763
Pavir.J01834 Panicum virgatum Pavir.J01834 I 0.763
SELMODRAFT_58361 Selaginella moellendorffii SELMODRAFT_58361 I 0.762
SELMODRAFT_68340 Selaginella moellendorffii SELMODRAFT_68340 I 0.762